RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 SNX21Q969T3 373 aa3.49□□□□□ -1.85
SCFD1-207ENST00000544052 BSCL2Q96G97 398 aaPredicted RBP3.49□□□□□ -1.85
SCFD1-207ENST00000544052 FCRL4Q96PJ5 515 aa3.49□□□□□ -1.85
SCFD1-207ENST00000544052 ZNF385AQ96PM9 386 aaKnown RBP3.49□□□□□ -1.85
SCFD1-207ENST00000544052 S1PR5Q9H228 398 aa3.49□□□□□ -1.85
SCFD1-207ENST00000544052 CDH20Q9HBT6 801 aa3.49□□□□□ -1.85
SCFD1-207ENST00000544052 RAB9BQ9NP90 201 aa3.49□□□□□ -1.85
SCFD1-207ENST00000544052 GOLGB1Q14789 3259 aaKnown RBP3.49□□□□□ -1.85
SCFD1-207ENST00000544052 E9PI62 339 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 IFIT3O14879 490 aaKnown RBP3.48□□□□□ -1.85
SCFD1-207ENST00000544052 NME6O75414 186 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-207ENST00000544052 HAPLN1P10915 354 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-207ENST00000544052 HSPA8P11142 646 aaKnown RBP3.48□□□□□ -1.85
SCFD1-207ENST00000544052 PSMA3P25788 255 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 LTBQ06643 244 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 KIF5AQ12840 1032 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 CUL3Q13618 768 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 RCN2Q14257 317 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 SLC39A14Q15043 492 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 CA9Q16790 459 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 MCMDC2Q4G0Z9 681 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 CCDC158Q5M9N0 1113 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 IRAK1BP1Q5VVH5 260 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 CORO6Q6QEF8 472 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 SLC9B2Q86UD5 537 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 TMEM139Q8IV31 216 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 APCDD1Q8J025 514 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 IQCF1Q8N6M8 205 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 OR11H4Q8NGC9 324 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 C9orf43Q8TAL5 461 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-207ENST00000544052 KRT35Q92764 455 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 DHX58Q96C10 678 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 THOC1Q96FV9 657 aaKnown RBP3.48□□□□□ -1.85
SCFD1-207ENST00000544052 ZNF479Q96JC4 524 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 MRPL9Q9BYD2 267 aaKnown RBP3.48□□□□□ -1.85
SCFD1-207ENST00000544052 ERAP1Q9NZ08 941 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 DAPK2Q9UIK4 370 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 ITGA11Q9UKX5 1188 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 LIPT1Q9Y234 373 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 WDR83OSQ9Y284 106 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 COL5A3P25940 1745 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-207ENST00000544052 CCDC7Q96M83 1385 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 HEG1Q9ULI3 1381 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 NCAPD2Q15021 1401 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 MYH14Q7Z406 1995 aaKnown RBP3.48□□□□□ -1.85
SCFD1-207ENST00000544052 MYMKA6NI61 221 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 GAPDHSO14556 408 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-207ENST00000544052 PRAF2O60831 178 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 RLN1P04808 185 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 PTMSP20962 102 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 RGS7P49802 495 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 HTR6P50406 440 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 MLLT10P55197 1068 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 MTCP1P56278 107 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 SEC61A1P61619 476 aaKnown RBP3.48□□□□□ -1.85
SCFD1-207ENST00000544052 DLK1P80370 383 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 RPL24P83731 157 aaKnown RBP3.48□□□□□ -1.85
SCFD1-207ENST00000544052 EGR4Q05215 589 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 AP1B1Q10567 949 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 HNRNPA0Q13151 305 aaKnown RBP3.48□□□□□ -1.85
SCFD1-207ENST00000544052 TNK1Q13470 666 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 UGCGQ16739 394 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 DUOXA1Q1HG43 343 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 SMU1Q2TAY7 513 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 CTU2Q2VPK5 515 aaKnown RBP3.48□□□□□ -1.85
SCFD1-207ENST00000544052 PLBD1Q6P4A8 553 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 PACS1Q6VY07 963 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 DZIP1Q86YF9 867 aaKnown RBP3.48□□□□□ -1.85
SCFD1-207ENST00000544052 UNC45BQ8IWX7 931 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 BMPERQ8N8U9 685 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 RDM1Q8NG50 284 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 SPATA20Q8TB22 786 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 IRGQQ8WZA9 623 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 ABHD8Q96I13 439 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 TMEM206Q9H813 350 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 TRPV4Q9HBA0 871 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 A4GALTQ9NPC4 353 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 KLHL1Q9NR64 748 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 CNIH4Q9P003 139 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 CDH7Q9ULB5 785 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 JRKLQ9Y4A0 524 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 MAP3K19Q56UN5 1328 aa3.48□□□□□ -1.85
SCFD1-207ENST00000544052 BRCA1P38398 1863 aaKnown RBP3.48□□□□□ -1.85
SCFD1-207ENST00000544052 C4AP0C0L4 1744 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 C4BP0C0L5 1744 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 SMIM30A4D0T7 59 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 MAGEA13PA6NCF6 341 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 ZNF263O14978 683 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 FCGR3BO75015 233 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 PAPSS2O95340 614 aaPredicted RBP3.47□□□□□ -1.85
SCFD1-207ENST00000544052 ALPLP05186 524 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 NGFRP08138 427 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 SAGP10523 405 aaPredicted RBP3.47□□□□□ -1.85
SCFD1-207ENST00000544052 TIA1P31483 386 aaKnown RBP eCLIP3.47□□□□□ -1.854e-8■■□□□ 11.9
SCFD1-207ENST00000544052 MNDAP41218 407 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 HNF4AP41235 474 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 CDKN2AP42771 156 aaKnown RBP3.47□□□□□ -1.85
SCFD1-207ENST00000544052 ADARP55265 1226 aaKnown RBP3.47□□□□□ -1.85
SCFD1-207ENST00000544052 DSCR9P59020 149 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 RPS18P62269 152 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms