RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 NUDT4Q9NZJ9 180 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 TMEM98Q9Y2Y6 226 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 ASPMQ8IZT6 3477 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 CHD8Q9HCK8 2581 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 ACACBO00763 2458 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 PLXND1Q9Y4D7 1925 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 ATP6AP2A0A1C7CYW4 349 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 ZNF840PA6NDX5 716 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 FAM220BPB1ANY3 271 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 PATE3B3GLJ2 98 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 SUPT3HB4E1H0 165 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 UBFD1O14562 309 aaKnown RBP10.12□□□□□ -0.79
CHFR-219ENST00000541341 PMPCBO75439 489 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 ATP6AP2O75787 350 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 OXSR1O95747 527 aaPredicted RBP10.12□□□□□ -0.79
CHFR-219ENST00000541341 OTCP00480 354 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 TFPTP0C1Z6 253 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 ZNF806P0C7X5 589 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 CD247P20963 164 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 DDX6P26196 483 aaKnown RBP eCLIP10.12□□□□□ -0.79
CHFR-219ENST00000541341 OXTRP30559 389 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 TIE1P35590 1138 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 TTPAP49638 278 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 CLK1P49759 484 aaKnown RBP10.12□□□□□ -0.79
CHFR-219ENST00000541341 ISL1P61371 349 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 ZNF33BQ06732 778 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 LRRC74AQ0VAA2 488 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 KCNJ8Q15842 424 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 PFKFB4Q16877 469 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 TYSND1Q2T9J0 566 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 PROX2Q3B8N5 592 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 PARP15Q460N3 678 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 PLK5Q496M5 336 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 C2orf27AQ580R0 203 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 PAGE2BQ5JRK9 111 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 MLIPQ5VWP3 458 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 CAPN13Q6MZZ7 669 aaPredicted RBP10.12□□□□□ -0.79
CHFR-219ENST00000541341 MSANTD2Q6P1R3 559 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 XKRXQ6PP77 449 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 AFTPHQ6ULP2 937 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 SLC16A12Q6ZSM3 486 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 TRIM69Q86WT6 500 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 SFTPA1Q8IWL2 248 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 CADM3Q8N126 398 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 PGBD3Q8N328 593 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 SYNPOQ8N3V7 929 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 TEX26Q8N6G2 289 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 FNDC5Q8NAU1 212 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 OR9I1Q8NGQ6 314 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 OR4L1Q8NH43 312 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 MCFD2Q8NI22 146 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 DYNC2LI1Q8TCX1 351 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 FAM162AQ96A26 154 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 YIPF6Q96EC8 236 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 CCDC97Q96F63 343 aaPredicted RBP10.12□□□□□ -0.79
CHFR-219ENST00000541341 PDLIM5Q96HC4 596 aaKnown RBP10.12□□□□□ -0.79
CHFR-219ENST00000541341 CDK5RAP1Q96SZ6 601 aaKnown RBP10.12□□□□□ -0.79
CHFR-219ENST00000541341 CCDC90BQ9GZT6 254 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 DUSP15Q9H1R2 295 aaPredicted RBP10.12□□□□□ -0.79
CHFR-219ENST00000541341 LINC00597Q9H2U6 94 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 ATP13A3Q9H7F0 1226 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 NMUR1Q9HB89 426 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.12□□□□□ -0.79
CHFR-219ENST00000541341 TRPM5Q9NZQ8 1165 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 ANGPTL3Q9Y5C1 460 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 EPG5Q9HCE0 2579 aa10.12□□□□□ -0.79
CHFR-219ENST00000541341 USP24Q9UPU5 2620 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 LOC285095A0A1B0GVY8 99 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 A0A1W2PQH9 124 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 NEMP2A6NFY4 417 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 C4orf47A7E2U8 309 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 FAM72CH0Y354 149 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 IRAK2O43187 625 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 ATG13O75143 517 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 NDUFS3O75489 264 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 JRKO75564 520 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 CCNDBP1O95273 360 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 KCNK5O95279 499 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 IGLV3-25P01717 112 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 HMBSP08397 361 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 LINC00032P0C843 101 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 ACPPP15309 386 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 CHRM3P20309 590 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 BCKDHBP21953 392 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 PCMT1P22061 227 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 PSMA3P25788 255 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 HTR1BP28222 390 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 ELK4P28324 431 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 IDUAP35475 653 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 PGFP49763 221 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 STC1P52823 247 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 IL2P60568 153 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 IL10RBQ08334 325 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 FOXC1Q12948 553 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 CSTF3Q12996 717 aaKnown RBP10.11□□□□□ -0.79
CHFR-219ENST00000541341 CDK5R2Q13319 367 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 EIF4EBP2Q13542 120 aaPredicted RBP10.11□□□□□ -0.79
CHFR-219ENST00000541341 CAPRIN1Q14444 709 aaKnown RBP10.11□□□□□ -0.79
CHFR-219ENST00000541341 DMC1Q14565 340 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 ZNF460Q14592 562 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms