RNA–Protein interactions for RNA: ENST00000540990.5

CACNB3-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-203ENST00000540990 CYP2U1Q7Z449 544 aa16.3■□□□□ 0.2
CACNB3-203ENST00000540990 VRK3Q8IV63 474 aa16.3■□□□□ 0.2
CACNB3-203ENST00000540990 BBS7Q8IWZ6 715 aa16.3■□□□□ 0.2
CACNB3-203ENST00000540990 PAF1Q8N7H5 531 aa16.3■□□□□ 0.2
CACNB3-203ENST00000540990 WDR20Q8TBZ3 569 aa16.3■□□□□ 0.2
CACNB3-203ENST00000540990 RAET1EQ8TD07 263 aa16.3■□□□□ 0.2
CACNB3-203ENST00000540990 MCOLN3Q8TDD5 553 aa16.3■□□□□ 0.2
CACNB3-203ENST00000540990 STARD8Q92502 1023 aa16.3■□□□□ 0.2
CACNB3-203ENST00000540990 SH3YL1Q96HL8 342 aaPredicted RBP16.3■□□□□ 0.2
CACNB3-203ENST00000540990 SIGLEC11Q96RL6 698 aa16.3■□□□□ 0.2
CACNB3-203ENST00000540990 BARD1Q99728 777 aaKnown RBP16.3■□□□□ 0.2
CACNB3-203ENST00000540990 P2RY13Q9BPV8 354 aa16.3■□□□□ 0.2
CACNB3-203ENST00000540990 CFHR5Q9BXR6 569 aa16.3■□□□□ 0.2
CACNB3-203ENST00000540990 CEP44Q9C0F1 390 aa16.3■□□□□ 0.2
CACNB3-203ENST00000540990 REXO4Q9GZR2 422 aaKnown RBP16.3■□□□□ 0.2
CACNB3-203ENST00000540990 MRPL17Q9NRX2 175 aaKnown RBP16.3■□□□□ 0.2
CACNB3-203ENST00000540990 SPATA6Q9NWH7 488 aaPredicted RBP16.3■□□□□ 0.2
CACNB3-203ENST00000540990 WARS2Q9UGM6 360 aaKnown RBP16.3■□□□□ 0.2
CACNB3-203ENST00000540990 CFAP99D6REC4 459 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 AP2A2O94973 939 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 FTH1P02794 183 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 FABP3P05413 133 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 HSD3B1P14060 373 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 ENGP17813 658 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 HSD3B2P26439 372 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 ITGA1P56199 1179 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 IL5RAQ01344 420 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 NR1D2Q14995 579 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 RFLNAQ6ZTI6 216 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 CAMKMTQ7Z624 323 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 TSPYL5Q86VY4 417 aaPredicted RBP16.29■□□□□ 0.2
CACNB3-203ENST00000540990 GPR65Q8IYL9 337 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 SYNPOQ8N3V7 929 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 CNIH3Q8TBE1 160 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 DGCR6LQ9BY27 220 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 CCNB1IP1Q9NPC3 277 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 AKIP1Q9NQ31 210 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 MBD1Q9UIS9 605 aaPredicted RBP16.29■□□□□ 0.2
CACNB3-203ENST00000540990 MAPRE3Q9UPY8 281 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 SLC22A14Q9Y267 594 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 COQ6Q9Y2Z9 468 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 U3KQV3 271 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 A8MX80 341 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 CLDN25C9JDP6 229 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 FPGTO14772 594 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 EPN2O95208 641 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 FKBP9O95302 570 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 ABCB1P08183 1280 aaPredicted RBP16.29■□□□□ 0.2
CACNB3-203ENST00000540990 OCM2P0CE71 109 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 OCMP0CE72 109 aaPredicted RBP16.29■□□□□ 0.2
CACNB3-203ENST00000540990 HOXA9P31269 272 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 HSPA14Q0VDF9 509 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 CHIT1Q13231 466 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 LAIR1Q6GTX8 287 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 NIPAL1Q6NVV3 410 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 ZCCHC8Q6NZY4 707 aaKnown RBP16.29■□□□□ 0.2
CACNB3-203ENST00000540990 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.29■□□□□ 0.2
CACNB3-203ENST00000540990 IGFN1Q86VF2 1251 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 SNRNP27Q8WVK2 155 aaKnown RBP16.29■□□□□ 0.2
CACNB3-203ENST00000540990 BHMTQ93088 406 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 APOL4Q9BPW4 351 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 CHST8Q9H2A9 424 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 CFAP97Q9P2B7 532 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 NFKBIL1Q9UBC1 381 aaPredicted RBP16.29■□□□□ 0.2
CACNB3-203ENST00000540990 BTNL2Q9UIR0 455 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 ERVK-11Q9UQG0 969 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 RUVBL1Q9Y265 456 aaKnown RBP16.29■□□□□ 0.2
CACNB3-203ENST00000540990 TDRKHQ9Y2W6 561 aaKnown RBP16.29■□□□□ 0.2
CACNB3-203ENST00000540990 SH3GLB1Q9Y371 365 aa16.29■□□□□ 0.2
CACNB3-203ENST00000540990 FUOMA2VDF0 154 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 MAGEB17A8MXT2 336 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 PTGES3LE9PB15 166 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 J3QRK9 145 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 SGTAO43765 313 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 XPNPEP2O43895 674 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 SLCO2B1O94956 709 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 POP4O95707 220 aaKnown RBP16.28■□□□□ 0.2
CACNB3-203ENST00000540990 ZNF682O95780 498 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 FUCA1P04066 466 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 EFNA1P20827 205 aaPredicted RBP16.28■□□□□ 0.2
CACNB3-203ENST00000540990 OPRL1P41146 370 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 CTSOP43234 321 aaPredicted RBP16.28■□□□□ 0.2
CACNB3-203ENST00000540990 DCDC1P59894 354 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 MAD2L1BPQ15013 274 aaPredicted RBP16.28■□□□□ 0.2
CACNB3-203ENST00000540990 NPTX1Q15818 432 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 RGS21Q2M5E4 152 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 SLC44A4Q53GD3 710 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 SYT12Q8IV01 421 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 CD99L2Q8TCZ2 262 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 RORBQ92753 470 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 ITFG2Q969R8 447 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 PANX1Q96RD7 426 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 WDR12Q9GZL7 423 aaKnown RBP16.28■□□□□ 0.2
CACNB3-203ENST00000540990 BRD9Q9H8M2 597 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 SCN3BQ9NY72 215 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 ERVK-18Q9QC07 812 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 SH3BP1Q9Y3L3 701 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 PCDHB11Q9Y5F2 797 aa16.28■□□□□ 0.2
CACNB3-203ENST00000540990 PABPN1LA6NDY0 278 aaKnown RBP16.27■□□□□ 0.2
CACNB3-203ENST00000540990 WASH3PC4AMC7 463 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms