RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 RGS9O75916 674 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 PRKCAP17252 672 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 OR1G1P47890 313 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 LAPTM4AQ15012 233 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 PDIA6Q15084 440 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 ATP6AP1Q15904 470 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 ZACNQ401N2 412 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 GLB1LQ6UWU2 654 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 YAF2Q8IY57 180 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 BEST3Q8N1M1 668 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 OR4L1Q8NH43 312 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 BORCS7-ASMTA0A0B4J1R7 106 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 IFNA2P01563 188 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 GJA1P17302 382 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 ZNHIT3Q15649 155 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 GRIK4Q16099 956 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 CARM1Q86X55 608 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 GEMIN6Q8WXD5 167 aaKnown RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 S100A16Q96FQ6 103 aaKnown RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 BCL7BQ9BQE9 202 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 SMOXQ9NWM0 555 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 SMPD4Q9NXE4 827 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 BHMG1C9JSJ3 638 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 CBR1P16152 277 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 APLP1P51693 650 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 VSX2P58304 361 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 COL28A1Q2UY09 1125 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 LDB1Q86U70 411 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 FAM217AQ8IXS0 508 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 SPATA22Q8NHS9 363 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 PRR11Q96HE9 360 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 TKTL2Q9H0I9 626 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 PARPBPQ9NWS1 579 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 SRRDQ9UH36 339 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 STXBP5LQ9Y2K9 1186 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 DNMT3AQ9Y6K1 912 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 CXorf49A8MYA2 514 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 MT-ND2P03891 347 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 CES1P23141 567 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 DNAJB2P25686 324 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 GSTM2P28161 218 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 OR3A3P47888 321 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 OR3A2P47893 321 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 RAB5CP51148 216 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 DBPQ10586 325 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 TCEA2Q15560 299 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 SPRED3Q2MJR0 410 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 MROH8Q9H579 483 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 POU2F3Q9UKI9 436 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 ZNRF3Q9ULT6 936 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 POM121CA8CG34 1229 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 CCL22O00626 93 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 SPDEFO95238 335 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 WDPCPO95876 746 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 S100PP25815 95 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 MAGEB1P43366 347 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 GBX2P52951 348 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 GABARAPL2P60520 117 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 GRIN2CQ14957 1233 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 SEC23BQ15437 767 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 ATAT1Q5SQI0 421 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 PIWIL3Q7Z3Z3 882 aaKnown RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 PGBD3Q8N328 593 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 OR8S1Q8NH09 359 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 SCGB1C1Q8TD33 95 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 IRGQQ8WZA9 623 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 COQ8BQ96D53 544 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 SLC41A3Q96GZ6 507 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 LRCH3Q96II8 777 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 FEM1CQ96JP0 617 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 ZIM2Q9NZV7 527 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 PCDHGA7Q9Y5G6 932 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 GPR179Q6PRD1 2367 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 AIPO00170 330 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 FAM189A1O60320 539 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 SLC25A12O75746 678 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 CTPS1P17812 591 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 PPM1AP35813 382 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 GRIA1P42261 906 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 HTRA4P83105 476 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 SLC15A3Q8IY34 581 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF565Q8N9K5 539 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 DNAJC5BQ9UF47 199 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 PCDHB3Q9Y5E6 796 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 A0A1B0GUL6 1792 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 SLC19A2O60779 497 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 TXNDC12O95881 172 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 TFP02787 698 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 NMBRP28336 390 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 WEE1P30291 646 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 PPP5CP53041 499 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 TARDBPQ13148 414 aaKnown RBP eCLIP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 NWD1Q149M9 1564 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 GRHL2Q6ISB3 625 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 YIPF7Q8N8F6 280 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 SNIP1Q8TAD8 396 aaKnown RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 GAB3Q8WWW8 586 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 DLC1Q96QB1 1528 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 GLOD4Q9HC38 313 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 RFPL3O75679 317 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms