RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	SMYD5	Q6GMV2	418 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	ZNF717	Q9BY31	904 aa	Predicted RBP	15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	PIGU	Q9H490	435 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	CHMP1A	Q9HD42	196 aa	Predicted RBP	15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	SATB2	Q9UPW6	733 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	TP53I11	O14683	189 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	SNX4	O95219	450 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	FADS2	O95864	444 aa	Known RBP	15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	CLU	P10909	449 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	GDI2	P50395	445 aa	Known RBP	15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	KCNJ2	P63252	427 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	TRIM74	Q86UV6	250 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	BANP	Q8N9N5	519 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	FATE1	Q969F0	183 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	PIWIL1	Q96J94	861 aa	Known RBP	15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	OR51V1	Q9H2C8	321 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	FAM208A	Q9UK61	1670 aa	Known RBP	15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	AGPS	O00116	658 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	CST6	Q15828	149 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	TXNRD3NB	Q6F5E7	133 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	SLC36A4	Q6YBV0	504 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	ZDHHC21	Q8IVQ6	265 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	MMAB	Q96EY8	250 aa	Predicted RBP	15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	DERL2	Q9GZP9	239 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	MVB12B	Q9H7P6	319 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	IL21R	Q9HBE5	538 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	MRM3	Q9HC36	420 aa	Known RBP	15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	SLC2A6	Q9UGQ3	507 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	ZNF208	O43345	1280 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	ETV3	P41162	512 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	C1orf61	Q13536	156 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	KBTBD2	Q8IY47	623 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	SVOPL	Q8N434	492 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	GTPBP3	Q969Y2	492 aa	Known RBP	15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	RELT	Q969Z4	430 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	FLRT1	Q9NZU1	646 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	CDH22	Q9UJ99	828 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	SCML1	Q9UN30	329 aa		15.32	■□□□□ 0.04
NCAPD3-213	ENST00000534532	hCG_2039718	K7EN88	272 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	ZNF41	P51814	821 aa	Predicted RBP	15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	ARHGDIB	P52566	201 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	GFOD2	Q3B7J2	385 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	KIAA1161	Q6NSJ0	714 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	WDR60	Q8WVS4	1066 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	TSGA13	Q96PP4	275 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	OR8D2	Q9GZM6	311 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	MS4A12	Q9NXJ0	267 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532		H3BQ06	376 aa	Predicted RBP	15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	APBB3	O95704	486 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	THRB	P10828	461 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	DRD1	P21728	446 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	IDH3A	P50213	366 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	UMODL1-AS1	Q8N2C9	162 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	CHST4	Q8NCG5	386 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	KCNJ9	Q92806	393 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	HCN2	Q9UL51	889 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	LCHN	A4D1U4	455 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	ZNF487	B1APH4	448 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	PSMD11	O00231	422 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	SLC22A2	O15244	555 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	FH	P07954	510 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	ACVR2A	P27037	513 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	CDKN1C	P49918	316 aa	Predicted RBP	15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	RPS15	P62841	145 aa	Known RBP	15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	IRF9	Q00978	393 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	SMCO1	Q147U7	214 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	OXSM	Q9NWU1	459 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	PLAGL1	Q9UM63	463 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	KCTD3	Q9Y597	815 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532		A8MT66	165 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	RGS10	O43665	173 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	SIX3	O95343	332 aa	Predicted RBP	15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	SEMA4F	O95754	770 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	STATH	P02808	62 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	QPCT	Q16769	361 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	IQCH	Q86VS3	1027 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	ZNF570	Q96NI8	536 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	GDE1	Q9NZC3	331 aa		15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	COL2A1	P02458	1487 aa	Predicted RBP	15.31	■□□□□ 0.04
NCAPD3-213	ENST00000534532	C2orf71	A6NGG8	1288 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	GP1BB	P13224	206 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	HNF1B	P35680	557 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	TARDBP	Q13148	414 aa	Known RBP eCLIP	15.3	■□□□□ 0.04	1e-6	■■■■■ 31.8
NCAPD3-213	ENST00000534532	CXorf57	Q6NSI4	855 aa	Known RBP	15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	MRPL10	Q7Z7H8	261 aa	Known RBP	15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	ZC3HC1	Q86WB0	502 aa	Known RBP	15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	UBE2J2	Q8N2K1	259 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	SLC2A13	Q96QE2	648 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532		A0A1W2PQ72	361 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	SSNA1	O43805	119 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	EBLN1	P0CF75	366 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	TCF4	P15884	667 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	PSMA1	P25786	263 aa	Known RBP	15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	FOLH1	Q04609	750 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	PUM1	Q14671	1186 aa	Known RBP eCLIP	15.3	■□□□□ 0.04	6e-6	■■□□□ 13.7
NCAPD3-213	ENST00000534532	NDUFA5	Q16718	116 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	C10orf62	Q5T681	223 aa	Predicted RBP	15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	TCEAL8	Q8IYN2	117 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	RBM15B	Q8NDT2	890 aa	Known RBP	15.3	■□□□□ 0.04

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms