RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 CASTOR2A6NHX0 329 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 MPTX1A8MV57 137 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 ZNF195O14628 629 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 TEX28O15482 410 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 TADA2AO75478 443 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 PSMD10O75832 226 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 IGHEP01854 428 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 FYNP06241 537 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 LDHCP07864 332 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 ERCC2P18074 760 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 RPL35AP18077 110 aaKnown RBP2.32□□□□□ -2.04
ATM-220ENST00000533526 CD22P20273 847 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 PRKACGP22612 351 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 MMP12P39900 470 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 TMEM50BP56557 158 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 KRTAP10-12P60413 245 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 CSNK2BP67870 215 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 GUCY2DQ02846 1103 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 ACSM1Q08AH1 577 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 ILF2Q12905 390 aaKnown RBP2.32□□□□□ -2.04
ATM-220ENST00000533526 FASTKD3Q14CZ7 662 aaKnown RBP2.32□□□□□ -2.04
ATM-220ENST00000533526 E2F5Q15329 346 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 PTPN14Q15678 1187 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 TAF1BQ53T94 588 aaPredicted RBP2.32□□□□□ -2.04
ATM-220ENST00000533526 C2CD6Q53TS8 623 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 DOK6Q6PKX4 331 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 BTN2A1Q7KYR7 527 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 CHST3Q7LGC8 479 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 PLPPR4Q7Z2D5 763 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.32□□□□□ -2.04
ATM-220ENST00000533526 SLC4A11Q8NBS3 891 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 SLC37A3Q8NCC5 494 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 ZNF519Q8TB69 540 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 KCNE4Q8WWG9 221 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 METTL21AQ8WXB1 218 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 PROX1Q92786 737 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 PGAP3Q96FM1 320 aaPredicted RBP2.32□□□□□ -2.04
ATM-220ENST00000533526 C18orf12Q96KH6 178 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 MUS81Q96NY9 551 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 CDCA3Q99618 268 aaPredicted RBP2.32□□□□□ -2.04
ATM-220ENST00000533526 RABEP2Q9H5N1 569 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 Q9H8V8 135 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 PRDM4Q9UKN5 801 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 RNF150Q9ULK6 438 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 MOB4Q9Y3A3 225 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 ANGPTL3Q9Y5C1 460 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 SELENOKQ9Y6D0 94 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 IL16Q14005 1332 aa2.32□□□□□ -2.04
ATM-220ENST00000533526 COL5A2P05997 1499 aaPredicted RBP2.32□□□□□ -2.04
ATM-220ENST00000533526 CACNA1FO60840 1977 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 LOC105371242A0A075B767 164 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 TRBV5-5A0A0J9YX44 114 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 C2CD4DB7Z1M9 353 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 SPRY1O43609 319 aaPredicted RBP2.31□□□□□ -2.04
ATM-220ENST00000533526 ATP6AP2O75787 350 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 CEACAM4O75871 244 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 CELF2O95319 508 aaKnown RBP2.31□□□□□ -2.04
ATM-220ENST00000533526 DUS4LO95620 317 aaKnown RBP2.31□□□□□ -2.04
ATM-220ENST00000533526 CLDN1O95832 211 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 OR52Z1P0C646 297 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 ZSCAN5DPP0CG00 497 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 CPT2P23786 658 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 PSMA3P25788 255 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 ELAVL4P26378 380 aaKnown RBP2.31□□□□□ -2.04
ATM-220ENST00000533526 MC5RP33032 325 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 OPRL1P41146 370 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 DNA2P51530 1060 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 CLDN15P56746 228 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 SLC8A3P57103 927 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 IRX6P78412 446 aaPredicted RBP2.31□□□□□ -2.04
ATM-220ENST00000533526 DLK1P80370 383 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 NFATC2Q13469 925 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 TRIM29Q14134 588 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 OPCMLQ14982 345 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 TAB1Q15750 504 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 LPAL2Q16609 132 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 KYNUQ16719 465 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 MOGAT2Q3SYC2 334 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 IL27RAQ6UWB1 636 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 LEKR1Q6ZMV7 388 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 Q6ZRP5 223 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 FCRLAQ7L513 359 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 CHMP1BQ7LBR1 199 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 TLK2Q86UE8 772 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 PRSS33Q8NF86 280 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 OR10Q1Q8NGQ4 319 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 SPSB1Q96BD6 273 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 RMDN1Q96DB5 314 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 PGM2Q96G03 612 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 LINC00615Q96LM1 132 aaPredicted RBP2.31□□□□□ -2.04
ATM-220ENST00000533526 ZNF300Q96RE9 604 aaPredicted RBP2.31□□□□□ -2.04
ATM-220ENST00000533526 PKP2Q99959 881 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 LRRC61Q9BV99 259 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 TXLNGYQ9BZA5 131 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 HOXD1Q9GZZ0 328 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 SDCBP2Q9H190 292 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 ACTL8Q9H568 366 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 MTHFD2LQ9H903 347 aaPredicted RBP2.31□□□□□ -2.04
ATM-220ENST00000533526 PANK3Q9H999 370 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms