RNA–Protein interactions for RNA: ENST00000531525.2

ATM-216, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-216ENST00000531525 TTC34A8MYJ7 566 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 KIF2AO00139 706 aaPredicted RBP6.13□□□□□ -1.43
ATM-216ENST00000531525 POLR3GO15318 223 aaPredicted RBP6.13□□□□□ -1.43
ATM-216ENST00000531525 SUV39H1O43463 412 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 TMPRSS11DO60235 418 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 PRAMEF11O60813 436 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 ZNF821O75541 412 aaPredicted RBP6.13□□□□□ -1.43
ATM-216ENST00000531525 SURF6O75683 361 aaKnown RBP6.13□□□□□ -1.43
ATM-216ENST00000531525 ZFPL1O95159 310 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 CH25HO95992 272 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 HLA-DQA2P01906 255 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 LIPFP07098 398 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 CA3P07451 260 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 PTPN4P29074 926 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 CLCN5P51795 746 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 HAND2P61296 217 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 MRPS34P82930 218 aaKnown RBP6.13□□□□□ -1.43
ATM-216ENST00000531525 NAE1Q13564 534 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 SHBQ15464 509 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 RNF151Q2KHN1 245 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 KCTD11Q693B1 232 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 SNRNP48Q6IEG0 339 aaKnown RBP6.13□□□□□ -1.43
ATM-216ENST00000531525 FBXO42Q6P3S6 717 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 NOTUMQ6P988 496 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 SIAH3Q8IW03 269 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 KBTBD2Q8IY47 623 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 ZDHHC23Q8IYP9 409 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 CADM3Q8N126 398 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 LCORLQ8N3X6 602 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 HUS1BQ8NHY5 278 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 RAD54LQ92698 747 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 SLC25A28Q96A46 364 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 LINGO1Q96FE5 620 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 DYNLL2Q96FJ2 89 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 CDKN2AIPNLQ96HQ2 116 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 LOXL4Q96JB6 756 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 PCYT2Q99447 389 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 PLIN2Q99541 437 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 BCL7BQ9BQE9 202 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 BDH2Q9BUT1 245 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 GON7Q9BXV9 100 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 NAPBQ9H115 298 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 STMN4Q9H169 189 aaPredicted RBP6.13□□□□□ -1.43
ATM-216ENST00000531525 FANCEQ9HB96 536 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 ZNF304Q9HCX3 659 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 KLC4Q9NSK0 619 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 PTGFRNQ9P2B2 879 aa6.13□□□□□ -1.43
ATM-216ENST00000531525 IPO11Q9UI26 975 aaKnown RBP6.13□□□□□ -1.43
ATM-216ENST00000531525 ASTN1O14525 1302 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 ZNF532Q9HCE3 1301 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.12□□□□□ -1.43
ATM-216ENST00000531525 MACROD2A1Z1Q3 448 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 CLDN4O14493 209 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 B4GALT4O60513 344 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 FCGR3BO75015 233 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 ATP6V1G1O75348 118 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 VNN2O95498 520 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 ACSL3O95573 720 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 KRT8P05787 483 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 ADH4P08319 380 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 POLR2MP0CAP2 368 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 CALCBP10092 127 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 PCNAP12004 261 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 ATP6V1C1P21283 382 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 GATA3P23771 443 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 NDUFS1P28331 727 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 CCL23P55773 120 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 NHLH2Q02577 135 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 GALNT3Q14435 633 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 LARS2Q15031 903 aaKnown RBP6.12□□□□□ -1.43
ATM-216ENST00000531525 CNGA3Q16281 694 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 ZNF568Q3ZCX4 644 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 AADACL4Q5VUY2 407 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 DCAF12L2Q5VW00 463 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 ENPP7Q6UWV6 458 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 CXCL17Q6UXB2 119 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 GBP7Q8N8V2 638 aaPredicted RBP6.12□□□□□ -1.43
ATM-216ENST00000531525 KIAA0895Q8NCT3 520 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 CCDC17Q96LX7 622 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 PRICKLE1Q96MT3 831 aaPredicted RBP6.12□□□□□ -1.43
ATM-216ENST00000531525 LRRC3BQ96PB8 259 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 MXRA8Q9BRK3 442 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 GPR61Q9BZJ8 451 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 AGO3Q9H9G7 860 aaKnown RBP6.12□□□□□ -1.43
ATM-216ENST00000531525 TBC1D17Q9HA65 648 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 RAB9BQ9NP90 201 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 ZCCHC3Q9NUD5 404 aaKnown RBP6.12□□□□□ -1.43
ATM-216ENST00000531525 GRID1Q9ULK0 1009 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 TNNQ9UQP3 1299 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 RIPK3Q9Y572 518 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 ZDBF2Q9HCK1 2354 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 NLRC5Q86WI3 1866 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 MICAL3Q7RTP6 2002 aa6.12□□□□□ -1.43
ATM-216ENST00000531525 GRIN2DO15399 1336 aa6.11□□□□□ -1.43
ATM-216ENST00000531525 A0A0A0MQY5 61 aa6.11□□□□□ -1.43
ATM-216ENST00000531525 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.11□□□□□ -1.43
ATM-216ENST00000531525 HSPB2A8KAH6 182 aa6.11□□□□□ -1.43
ATM-216ENST00000531525 SMIM22K7EJ46 135 aa6.11□□□□□ -1.43
ATM-216ENST00000531525 SLC16A3O15427 465 aaKnown RBP6.11□□□□□ -1.43
ATM-216ENST00000531525 MAGEB2O15479 319 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms