RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 CLEC20AQ6ZU45 233 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 TMEM110Q86TL2 294 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 PIGZQ86VD9 579 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 MON1AQ86VX9 555 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 ZNF677Q86XU0 584 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 TMTC1Q8IUR5 882 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 NUP93Q8N1F7 819 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 ELMOD1Q8N336 334 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 WDTC1Q8N5D0 677 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 LEMD2Q8NC56 503 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 TMEM35BQ8NCS4 154 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 SUSD6Q92537 303 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 SECISBP2LQ93073 1101 aaKnown RBP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 PSMG2Q969U7 264 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 HSFY1Q96LI6 401 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 NECTIN4Q96NY8 510 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 ZNF385AQ96PM9 386 aaKnown RBP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 PCDHB18PQ96TA0 734 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 EPYCQ99645 322 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 SEPT5Q99719 369 aaPredicted RBP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 AGPAT1Q99943 283 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 SYT11Q9BT88 431 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 STN1Q9H668 368 aaKnown RBP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 UBE2ZQ9H832 354 aaPredicted RBP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 GRPEL1Q9HAV7 217 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 LRRC4Q9HBW1 653 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 DMAP1Q9NPF5 467 aaPredicted RBP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 ACP6Q9NPH0 428 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 WASH6PQ9NQA3 447 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 FAM49BQ9NUQ9 324 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 TMEM30AQ9NV96 361 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 ZNHIT6Q9NWK9 470 aaKnown RBP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 EHD2Q9NZN4 543 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 UXTQ9UBK9 157 aaPredicted RBP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 NOCTQ9UK39 431 aaKnown RBP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 TSPAN16Q9UKR8 245 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 BZW2Q9Y6E2 419 aaKnown RBP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 WDR81Q562E7 1941 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 C17orf113A0A1B0GUU1 675 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 FAM92AA1XBS5 289 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 ZNF840PA6NDX5 716 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 AKR1B15C9JRZ8 316 aaPredicted RBP3.18□□□□□ -1.9
VPS13B-209ENST00000521559 H3BQ06 376 aaPredicted RBP3.18□□□□□ -1.9
VPS13B-209ENST00000521559 J3KRW8 73 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 M0QYV0 167 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 TULP2O00295 520 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 TSPAN4O14817 238 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 CLGNO14967 610 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 MBTPS2O43462 519 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 RTN3O95197 1032 aaPredicted RBP3.18□□□□□ -1.9
VPS13B-209ENST00000521559 LSM8O95777 96 aaKnown RBP3.18□□□□□ -1.9
VPS13B-209ENST00000521559 SERPING1P05155 500 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 IGHV4-30-4P0DP06 118 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 SKILP12757 684 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 TTKP33981 857 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 ACADSBP45954 432 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 RGS7P49802 495 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 CCR5P51681 352 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 TKTL1P51854 596 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 SNX16P57768 344 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 NTHL1P78549 312 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 KLHL30Q0D2K2 578 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 GRSF1Q12849 480 aaKnown RBP eCLIP3.18□□□□□ -1.9
VPS13B-209ENST00000521559 DLG1Q12959 904 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 TAF10Q12962 218 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 RUNX2Q13950 521 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 RAB41Q5JT25 222 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 WDR45BQ5MNZ6 344 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 CYP4A22Q5TCH4 519 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 TAF3Q5VWG9 929 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 SNX30Q5VWJ9 437 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 PM20D1Q6GTS8 502 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 ACAD10Q6JQN1 1059 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 PPP1R2P3Q6NXS1 205 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 PMF1Q6P1K2 205 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 FAM122CQ6P4D5 195 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 DENND5BQ6ZUT9 1274 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 BBS12Q6ZW61 710 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 USP43Q70EL4 1123 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 ZNF571Q7Z3V5 609 aaPredicted RBP3.18□□□□□ -1.9
VPS13B-209ENST00000521559 SCD5Q86SK9 330 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 ADGRG6Q86SQ4 1221 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 TMEM150AQ86TG1 271 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 VPS36Q86VN1 386 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 ERICH1Q86X53 443 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 PHF13Q86YI8 300 aaPredicted RBP3.18□□□□□ -1.9
VPS13B-209ENST00000521559 CCDC105Q8IYK2 499 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 SCML4Q8N228 414 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 ARHGAP18Q8N392 663 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 CPXM2Q8N436 756 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 TC2NQ8N9U0 490 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 TNIP2Q8NFZ5 429 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 RFWD2Q8NHY2 731 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 ITFG1Q8TB96 612 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 SLC20A1Q8WUM9 679 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 IRGQQ8WZA9 623 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 CNOT9Q92600 299 aaKnown RBP3.18□□□□□ -1.9
VPS13B-209ENST00000521559 MRPS31Q92665 395 aaKnown RBP3.18□□□□□ -1.9
VPS13B-209ENST00000521559 FBXO32Q969P5 355 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 PPP1R13BQ96KQ4 1090 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms