RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP1.39□□□□□ -2.19
XRN1-214ENST00000498077 HMGXB4Q9UGU5 601 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ARMCX3Q9UH62 379 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 FBXO40Q9UH90 709 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 CTNNA3Q9UI47 895 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 KCND3Q9UK17 655 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 CELA1Q9UNI1 258 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PA2G4Q9UQ80 394 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 FARSAQ9Y285 508 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 BACE2Q9Y5Z0 518 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 IGF2RP11717 2491 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 TRBV6-7A0A0A0MS04 114 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TCRBV7S3A2A0A539 114 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 DDTLA6NHG4 134 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 RTCAO00442 366 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 DVL2O14641 736 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PRPF4O43172 522 aaKnown RBP eCLIP1.38□□□□□ -2.19
XRN1-214ENST00000498077 ZBTB14O43829 449 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 UBXN7O94888 489 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 IGKV3-20P01619 116 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 GSNP06396 782 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SFTPCP11686 197 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 EPHA1P21709 976 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TGM2P21980 687 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PRPH2P23942 346 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ABCD3P28288 659 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 FMO3P31513 532 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 L1CAMP32004 1257 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 GRK4P32298 578 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 KDELR2P33947 212 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 KRT2P35908 639 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 EIF4A3P38919 411 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 CCNFP41002 786 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ADCYAP1R1P41586 468 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 IL12RB1P42701 662 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 RPS5P46782 204 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 DGKEP52429 567 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 EIF4A1P60842 406 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 ADARB1P78563 741 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 DEFA5Q01523 94 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 NSUN2Q08J23 767 aaKnown RBP eCLIP1.38□□□□□ -2.19
XRN1-214ENST00000498077 GBX1Q14549 363 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 HEPACAMQ14CZ8 416 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CTF1Q16619 201 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 MUM1Q2TAK8 710 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SUPT20HL1Q3ZLR7 823 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 RILPL1Q5EBL4 403 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 FAM222AQ5U5X8 452 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 RNLSQ5VYX0 342 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 NAA35Q5VZE5 725 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 DEGS2Q6QHC5 323 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 NT5DC3Q86UY8 548 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CADM2Q8N3J6 435 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SFRP1Q8N474 314 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 KLHL36Q8N4N3 616 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SLC43A3Q8NBI5 491 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 OR1J1Q8NGS3 322 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 RNASE11Q8TAA1 199 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 GDAP1Q8TB36 358 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CD99L2Q8TCZ2 262 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TFB1MQ8WVM0 346 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 SLC5A5Q92911 643 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CCDC127Q96BQ5 260 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CTHRC1Q96CG8 243 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 LINGO1Q96FE5 620 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ART5Q96L15 291 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ZNF597Q96LX8 424 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ZNF512Q96ME7 567 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 MYD88Q99836 296 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 C8orf33Q9H7E9 229 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 C1GALT1Q9NS00 363 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ST6GALNAC1Q9NSC7 600 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 SYBUQ9NX95 663 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 EHD2Q9NZN4 543 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TBC1D14Q9P2M4 693 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 STK39Q9UEW8 545 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 NAT8Q9UHE5 227 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 MKLN1Q9UL63 735 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CLEC4AQ9UMR7 237 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CA5BQ9Y2D0 317 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 AGRNO00468 2067 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ASH1LQ9NR48 2969 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 A0A087X0B3 334 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 TEX13CA0A0J9YWL9 993 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CCDC154A6NI56 674 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 OR5K4A6NMS3 321 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 FOXO6A8MYZ6 492 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 F5H423 210 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 NFKBIEO00221 500 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PPM1DO15297 605 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PHGDHO43175 533 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 C1QL1O75973 258 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ZBED1O96006 694 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 RAF1P04049 648 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 IGKV1-16P04430 117 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TPM1P09493 284 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CNPP09543 421 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 LPOP22079 712 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 ME2P23368 584 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms