RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 PLAGL1Q9UM63 463 aa13.7□□□□□ -0.22
VPS26A-209ENST00000497564 ICKQ9UPZ9 632 aa13.7□□□□□ -0.22
VPS26A-209ENST00000497564 RNF11Q9Y3C5 154 aa13.7□□□□□ -0.22
VPS26A-209ENST00000497564 FIS1Q9Y3D6 152 aa13.7□□□□□ -0.22
VPS26A-209ENST00000497564 DYRK1BQ9Y463 629 aa13.7□□□□□ -0.22
VPS26A-209ENST00000497564 USP24Q9UPU5 2620 aa13.7□□□□□ -0.22
VPS26A-209ENST00000497564 A0A1W2PPV9 198 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 SERTM1A2A2V5 107 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 CCT8L1PA6NM43 557 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 PRAMEF4O60810 478 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 VPS4BO75351 444 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 SKAP2O75563 359 aaPredicted RBP13.69□□□□□ -0.22
VPS26A-209ENST00000497564 SERPINA6P08185 405 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 JUPP14923 745 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 SERPINB3P29508 390 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 HMOX2P30519 316 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 SHMT2P34897 504 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 HNF4AP41235 474 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 RXRGP48443 463 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 BNIP3Q12983 259 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 CHIT1Q13231 466 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 TRIP6Q15654 476 aaKnown RBP13.69□□□□□ -0.22
VPS26A-209ENST00000497564 XKR7Q5GH72 579 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 SPDYAQ5MJ70 313 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 PRAMEF9Q5VWM5 478 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 PRAMEF13Q5VWM6 474 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 FAM91A1Q658Y4 838 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 TRPM8Q7Z2W7 1104 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 NAGSQ8N159 534 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 SFRP1Q8N474 314 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 LINC01555Q8NAE3 123 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 ZNF548Q8NEK5 533 aaPredicted RBP13.69□□□□□ -0.22
VPS26A-209ENST00000497564 LRRC37BQ96QE4 947 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 OR52B2Q96RD2 323 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 MYLK2Q9H1R3 596 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 TUBB1Q9H4B7 451 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 SLC40A1Q9NP59 571 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 OR6C2Q9NZP2 312 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 TIMM22Q9Y584 194 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 PCDHGB2Q9Y5G2 931 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 DMXL2Q8TDJ6 3036 aa13.69□□□□□ -0.22
VPS26A-209ENST00000497564 FAM221BA6H8Z2 402 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 E7EQ34 232 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 LMO7DNF2Z398 122 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 PIP5K1BO14986 540 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 AQP9O43315 295 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 HYAL3O43820 417 aaPredicted RBP13.68□□□□□ -0.22
VPS26A-209ENST00000497564 PRICKLE3O43900 615 aaPredicted RBP13.68□□□□□ -0.22
VPS26A-209ENST00000497564 PCDHGA12O60330 932 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 CCDC22O60826 627 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 SDC3O75056 442 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 PIAS2O75928 621 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 KRT6AP02538 564 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 KRT6BP04259 564 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 ARL1P40616 181 aaPredicted RBP13.68□□□□□ -0.22
VPS26A-209ENST00000497564 KRT6CP48668 564 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 IRF8Q02556 426 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 C1orf61Q13536 156 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 TCEA2Q15560 299 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 LSM12Q3MHD2 195 aaKnown RBP13.68□□□□□ -0.22
VPS26A-209ENST00000497564 ATG9BQ674R7 924 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 GRHL2Q6ISB3 625 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 FOXR1Q6PIV2 292 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 SLCO4C1Q6ZQN7 724 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 LARP4Q71RC2 724 aaKnown RBP eCLIP13.68□□□□□ -0.22
VPS26A-209ENST00000497564 SLCO6A1Q86UG4 719 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 C17orf82Q86X59 251 aaPredicted RBP13.68□□□□□ -0.22
VPS26A-209ENST00000497564 TRIM48Q8IWZ4 208 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 DCBLD1Q8N8Z6 715 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 FAM46DQ8NEK8 389 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 CEP70Q8NHQ1 597 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 RHBDD1Q8TEB9 315 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 SLC37A2Q8TED4 501 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 SAP25Q8TEE9 199 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 ZDHHC1Q8WTX9 485 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 SLC5A11Q8WWX8 675 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 USP7Q93009 1102 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 NEIL2Q969S2 332 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 RILPQ96NA2 401 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 CNTNAP3BQ96NU0 1288 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 CNTNAP3Q9BZ76 1288 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 WDR55Q9H6Y2 383 aaPredicted RBP13.68□□□□□ -0.22
VPS26A-209ENST00000497564 ABCF3Q9NUQ8 709 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 TOR4AQ9NXH8 423 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 CPNE7Q9UBL6 633 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 CSNK1G3Q9Y6M4 447 aa13.68□□□□□ -0.22
VPS26A-209ENST00000497564 GOLGA4Q13439 2230 aaKnown RBP13.68□□□□□ -0.22
VPS26A-209ENST00000497564 CELSR3Q9NYQ7 3312 aa13.67□□□□□ -0.22
VPS26A-209ENST00000497564 PRAMEF33A0A0G2JMD5 474 aa13.67□□□□□ -0.22
VPS26A-209ENST00000497564 H0YIV9 168 aa13.67□□□□□ -0.22
VPS26A-209ENST00000497564 MANBAO00462 879 aa13.67□□□□□ -0.22
VPS26A-209ENST00000497564 FLRT2O43155 660 aa13.67□□□□□ -0.22
VPS26A-209ENST00000497564 VIPP01282 170 aa13.67□□□□□ -0.22
VPS26A-209ENST00000497564 FTH1P19P0C7X4 201 aa13.67□□□□□ -0.22
VPS26A-209ENST00000497564 PRR35P0CG20 571 aa13.67□□□□□ -0.22
VPS26A-209ENST00000497564 EPHA3P29320 983 aa13.67□□□□□ -0.22
VPS26A-209ENST00000497564 EPHA8P29322 1005 aaPredicted RBP13.67□□□□□ -0.22
VPS26A-209ENST00000497564 FASLGP48023 281 aa13.67□□□□□ -0.22
VPS26A-209ENST00000497564 IRX1P78414 480 aaPredicted RBP13.67□□□□□ -0.22
VPS26A-209ENST00000497564 IFT88Q13099 833 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms