RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 NETO1Q8TDF5 533 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 PYCR2Q96C36 320 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 AP2M1Q96CW1 435 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 PHF12Q96QT6 1004 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 REXO4Q9GZR2 422 aaKnown RBP9.35□□□□□ -0.91
NPHP3-209ENST00000493732 GABARAPL1Q9H0R8 117 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 ATG10Q9H0Y0 220 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 ABCG8Q9H221 673 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 C11orf49Q9H6J7 331 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 TM9SF3Q9HD45 589 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 IL23AQ9NPF7 189 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 FBXO10Q9UK96 956 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 PPT2Q9UMR5 302 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 RWDD3Q9Y3V2 267 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 LOC100130705A0A1B0GUX0 176 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 SLC5A10A0PJK1 596 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 ARHGEF33A8MVX0 844 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 SGTAO43765 313 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 POU2F2P09086 479 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 CCDC159P0C7I6 412 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 ITGAMP11215 1152 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 SYN1P17600 705 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 CRHBPP24387 322 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 TACR1P25103 407 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 GSTM2P28161 218 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 MMP12P39900 470 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 ETV3P41162 512 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 ELP6Q0PNE2 266 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 TMEM115Q12893 351 aaPredicted RBP9.35□□□□□ -0.91
NPHP3-209ENST00000493732 DOC2AQ14183 400 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 E2F2Q14209 437 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 RAB39AQ14964 217 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 ZXDCQ2QGD7 858 aaPredicted RBP9.35□□□□□ -0.91
NPHP3-209ENST00000493732 ZIK1Q3SY52 487 aaPredicted RBP9.35□□□□□ -0.91
NPHP3-209ENST00000493732 PAGE2BQ5JRK9 111 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 C6orf141Q5SZD1 244 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 OR4F3Q6IEY1 312 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 CAPN13Q6MZZ7 669 aaPredicted RBP9.35□□□□□ -0.91
NPHP3-209ENST00000493732 SERPINA13PQ6UXR4 307 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 ZDHHC21Q8IVQ6 265 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 PHACTR4Q8IZ21 702 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 CPA6Q8N4T0 437 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 FAM86B1Q8N7N1 296 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 OR56A3Q8NH54 315 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 RAB2BQ8WUD1 216 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 C12orf43Q96C57 262 aaKnown RBP9.35□□□□□ -0.91
NPHP3-209ENST00000493732 MRGPRX3Q96LB0 322 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 INPP5KQ9BT40 448 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 ADNPQ9H2P0 1102 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 PLGRKTQ9HBL7 147 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 SGK2Q9HBY8 427 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 IL1RAPQ9NPH3 570 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 ATAD3AQ9NVI7 634 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 SIRT5Q9NXA8 310 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 STOX2Q9P2F5 926 aaPredicted RBP9.35□□□□□ -0.91
NPHP3-209ENST00000493732 PCDHB11Q9Y5F2 797 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 SNX5Q9Y5X3 404 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 CEP350Q5VT06 3117 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 MGAT4DA6NG13 374 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 TRIM64BA6NI03 449 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 OR2AG2A6NM03 316 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 ZBBXA8MT70 800 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 SCAMP2O15127 329 aaKnown RBP9.34□□□□□ -0.91
NPHP3-209ENST00000493732 TSPAN6O43657 245 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 HS6ST1O60243 411 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 MRPS14O60783 128 aaKnown RBP9.34□□□□□ -0.91
NPHP3-209ENST00000493732 MOSPD3O75425 235 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 ADH1CP00326 375 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 FABP3P05413 133 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 GSNP06396 782 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 ABCB1P08183 1280 aaPredicted RBP9.34□□□□□ -0.91
NPHP3-209ENST00000493732 CDK4P11802 303 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 ENGP17813 658 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 DNAJA1P31689 397 aaKnown RBP9.34□□□□□ -0.91
NPHP3-209ENST00000493732 DGKGP49619 791 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 RAB15P59190 212 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 PHEXP78562 749 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 HPCAP84074 193 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 PMS2P3Q13401 168 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 NAE1Q13564 534 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 LAPTM5Q13571 262 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 ACOX1Q15067 660 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 TEAD4Q15561 434 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 NKG7Q16617 165 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 HIST2H2ACQ16777 129 aaPredicted RBP9.34□□□□□ -0.91
NPHP3-209ENST00000493732 GTDC1Q4AE62 458 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 BCL7AQ4VC05 210 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 CPTPQ5TA50 214 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 HIST2H2AA3Q6FI13 130 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 OR2T5Q6IEZ7 315 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 CES5AQ6NT32 575 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 ZCCHC8Q6NZY4 707 aaKnown RBP9.34□□□□□ -0.91
NPHP3-209ENST00000493732 MED27Q6P2C8 311 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 GALNT18Q6P9A2 607 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 LIPIQ6XZB0 460 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 ZNF621Q6ZSS3 439 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 EIF3MQ7L2H7 374 aaKnown RBP9.34□□□□□ -0.91
NPHP3-209ENST00000493732 R3HCC1LQ7Z5L2 792 aaKnown RBP9.34□□□□□ -0.91
NPHP3-209ENST00000493732 NLRP8Q86W28 1048 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 OR13F1Q8NGS4 319 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms