RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 RBP3P10745 1247 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 COX6A1P12074 109 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 CD9P21926 228 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 FOXN2P32314 431 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 CARSP49589 748 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 CSE1LP55060 971 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 HADHBP55084 474 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 VSX2P58304 361 aaPredicted RBP11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 RUNX1T1Q06455 604 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 FAM214AQ32MH5 1076 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 SYTL3Q4VX76 610 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 DNAJC21Q5F1R6 531 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 WASHC2DQ5SRD0 308 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 KCTD11Q693B1 232 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 NCCRP1Q6ZVX7 275 aaPredicted RBP11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 NDUFAF7Q7L592 441 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 NLRP9Q7RTR0 991 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 LAPTM4BQ86VI4 370 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 VRK3Q8IV63 474 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 CDKL3Q8IVW4 592 aaPredicted RBP11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 SLC22A15Q8IZD6 547 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 SIRT6Q8N6T7 355 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 AMER2Q8N7J2 671 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 OR2L8Q8NGY9 312 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 STYXQ8WUJ0 223 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 SLC22A18Q96BI1 424 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 MIEF2Q96C03 454 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 SECISBP2Q96T21 854 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 FAM118BQ9BPY3 351 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 ANP32EQ9BTT0 268 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 CLEC4MQ9H2X3 399 aaPredicted RBP11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 ZNF304Q9HCX3 659 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 INTS7Q9NVH2 962 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 ZNHIT6Q9NWK9 470 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 C3orf18Q9UK00 162 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 PKD1L1Q8TDX9 2849 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 IGLV3-12A0A075B6K2 115 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 NSG1A0A0A6YYJ2 146 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 FAM237BA0A1B0GVD1 139 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 A0A1W2PQ72 361 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 MROH6A6NGR9 719 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 IDSB3KWA1 339 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 STK10O94804 968 aaKnown RBP11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 ATE1O95260 518 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 WDPCPO95876 746 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 SERPINA7P05543 415 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 CELA2AP08217 269 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 OR56A5P0C7T3 313 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 FDXRP22570 491 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 MSNP26038 577 aaKnown RBP11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 CCR7P32248 378 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 EIF3EP60228 445 aaKnown RBP11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 OCA2Q04671 838 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 POU6F1Q14863 301 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 SF1Q15637 639 aaKnown RBP11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 CCDC181Q5TID7 509 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 FRMPD2BQ6IN97 320 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 HMBOX1Q6NT76 420 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 DARS2Q6PI48 645 aaKnown RBP11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 ARHGEF18Q6ZSZ5 1173 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 CPSF7Q8N684 471 aaKnown RBP11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 ZUFSPQ96AP4 578 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 PPP1R2P1Q96PQ5 205 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 FERMT1Q9BQL6 677 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 RASSF1Q9NS23 344 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 ABHD10Q9NUJ1 306 aa11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 PIH1D1Q9NWS0 290 aaKnown RBP11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 STOX2Q9P2F5 926 aaPredicted RBP11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 ZNF282Q9UDV7 671 aaPredicted RBP11.11□□□□□ -0.63
CACNA1C-228ENST00000492150 CPAMD8Q8IZJ3 1885 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 LOC105369274A0A096LPK9 316 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 LOC102723532A0A0G2JNH3 316 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 HYKKA2RU49 373 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 CCDC162PA2VCL2 907 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 TARM1B6A8C7 271 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 RASGRF2O14827 1237 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 PJA2O43164 708 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 KCNAB3O43448 404 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 NRP2O60462 931 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 SRPX2O60687 465 aaPredicted RBP11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 GPC4O75487 556 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 TOXO94900 526 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 BMP10O95393 424 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 IFNA2P01563 188 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 COPS2P61201 443 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 EEF1A2Q05639 463 aaKnown RBP11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 TRIM14Q14142 442 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 PRMT9Q6P2P2 845 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 C16orf47Q6ZP98 133 aaPredicted RBP11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 DCUN1D3Q8IWE4 304 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 OR4N4Q8N0Y3 316 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 CFAP61Q8NHU2 1237 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 LKAAEAR1Q8TD35 194 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 ASB5Q8WWX0 329 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 C10orf90Q96M02 699 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 NEUROD4Q9HD90 331 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 LRFN1Q9P244 771 aa11.1□□□□□ -0.63
CACNA1C-228ENST00000492150 ZC3H7BQ9UGR2 993 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms