RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 TIMM22Q9Y584 194 aa22.08■■□□□ 1.13
USF3-203ENST00000491165 TRIM64CA6NLI5 447 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 STX16O14662 325 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 RASAL1O95294 804 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 CHEK2O96017 543 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 ATP1B2P14415 290 aaPredicted RBP22.07■■□□□ 1.12
USF3-203ENST00000491165 GSK3BP49841 420 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 PFN3P60673 137 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 ESRRGP62508 458 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 ANGPT1Q15389 498 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 LYPLAL1Q5VWZ2 237 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 SPRED1Q7Z699 444 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 PTRH1Q86Y79 214 aaKnown RBP22.07■■□□□ 1.12
USF3-203ENST00000491165 SLC22A18ASQ8N1D0 253 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 DNAJB14Q8TBM8 379 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 FOXJ1Q92949 421 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 KCTD14Q9BQ13 255 aaPredicted RBP22.07■■□□□ 1.12
USF3-203ENST00000491165 CLPBQ9H078 707 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 OAZ3Q9UMX2 235 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 PRAMEF26H0Y7S4 382 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 FPGTO14772 594 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 EEDO75530 441 aaKnown RBP22.07■■□□□ 1.12
USF3-203ENST00000491165 PKMP14618 531 aaKnown RBP22.07■■□□□ 1.12
USF3-203ENST00000491165 ZNF8P17098 575 aaPredicted RBP22.07■■□□□ 1.12
USF3-203ENST00000491165 ITGB6P18564 788 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 MSH3P20585 1137 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 DCTN2Q13561 401 aaKnown RBP22.07■■□□□ 1.12
USF3-203ENST00000491165 SLC36A3Q495N2 470 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 FBXO48Q5FWF7 155 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 GPR141Q7Z602 305 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 ZNF547Q8IVP9 402 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 GAB3Q8WWW8 586 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 VPS33AQ96AX1 596 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 C1QTNF3Q9BXJ4 246 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 TRIM8Q9BZR9 551 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 TRIM39Q9HCM9 518 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 PRKAB1Q9Y478 270 aa22.07■■□□□ 1.12
USF3-203ENST00000491165 LRP4O75096 1905 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 CDC7O00311 574 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 ESRRBO95718 433 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 MLYCDO95822 493 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 UROSP10746 265 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 MTHFD1P11586 935 aaKnown RBP22.06■■□□□ 1.12
USF3-203ENST00000491165 MYCLP1P12525 358 aaPredicted RBP22.06■■□□□ 1.12
USF3-203ENST00000491165 RPS3P23396 243 aaKnown RBP eCLIP22.06■■□□□ 1.12
USF3-203ENST00000491165 TEAD1P28347 426 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 AKT2P31751 481 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 RABL3Q5HYI8 236 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 SLC36A4Q6YBV0 504 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 ABI3BPQ7Z7G0 1075 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 SYVN1Q86TM6 617 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 IFNEQ86WN2 208 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 NKAPQ8N5F7 415 aaKnown RBP22.06■■□□□ 1.12
USF3-203ENST00000491165 OR13H1Q8NG92 308 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 C1orf216Q8TAB5 229 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 GPR21Q99679 349 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 ASPDHA6ND91 283 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 NPEPPSL1A6NEC2 478 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 CCDC154A6NI56 674 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 BTN3A1O00481 513 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 LILRB5O75023 590 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 ESR1P03372 595 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 PYGLP06737 847 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 SP9P0CG40 484 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 RPL10P27635 214 aaKnown RBP22.06■■□□□ 1.12
USF3-203ENST00000491165 LIPEQ05469 1076 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 XKR7Q5GH72 579 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 TEX37Q96LM6 180 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 BRINP2Q9C0B6 783 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 DUSP15Q9H1R2 295 aaPredicted RBP22.06■■□□□ 1.12
USF3-203ENST00000491165 PFDN4Q9NQP4 134 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 GULP1Q9UBP9 304 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 LEF1Q9UJU2 399 aaPredicted RBP22.06■■□□□ 1.12
USF3-203ENST00000491165 PCTPQ9UKL6 214 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 VPS9D1Q9Y2B5 631 aa22.06■■□□□ 1.12
USF3-203ENST00000491165 TP53BP1Q12888 1972 aaPredicted RBP22.05■■□□□ 1.12
USF3-203ENST00000491165 NCF1BA6NI72 391 aaPredicted RBP22.05■■□□□ 1.12
USF3-203ENST00000491165 NCF1CA8MVU1 366 aaPredicted RBP22.05■■□□□ 1.12
USF3-203ENST00000491165 SNX2O60749 519 aa22.05■■□□□ 1.12
USF3-203ENST00000491165 SLC22A3O75751 556 aa22.05■■□□□ 1.12
USF3-203ENST00000491165 NCF1P14598 390 aaPredicted RBP22.05■■□□□ 1.12
USF3-203ENST00000491165 CD27P26842 260 aa22.05■■□□□ 1.12
USF3-203ENST00000491165 PRDX3P30048 256 aaKnown RBP22.05■■□□□ 1.12
USF3-203ENST00000491165 AASDHQ4L235 1098 aaPredicted RBP22.05■■□□□ 1.12
USF3-203ENST00000491165 PCED1AQ9H1Q7 454 aa22.05■■□□□ 1.12
USF3-203ENST00000491165 HS3ST3A1Q9Y663 406 aa22.05■■□□□ 1.12
USF3-203ENST00000491165 TCRBV5S2A0A599 114 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 PFDN6O15212 129 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 ACOX3O15254 700 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 KLK8O60259 260 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 WNT1P04628 370 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 CEACAM5P06731 702 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 UMPSP11172 480 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 ZFP36L2P47974 494 aaKnown RBP22.04■■□□□ 1.12
USF3-203ENST00000491165 AGTR2P50052 363 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 EEFSECP57772 596 aaKnown RBP22.04■■□□□ 1.12
USF3-203ENST00000491165 RBBP7Q16576 425 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 PAGE3Q5JUK9 113 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 MACC1Q6ZN28 852 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 Q6ZSR6 202 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms