RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 ARRDC3Q96B67 414 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 ZNF845Q96IR2 970 aaPredicted RBP3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 FEM1CQ96JP0 617 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 PPP1R13BQ96KQ4 1090 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 BMFQ96LC9 184 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 C1orf74Q96LT6 269 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 CPXM1Q96SM3 734 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 CALN1Q9BXU9 219 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 SLC17A9Q9BYT1 436 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 FAM204AQ9H8W3 233 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 UBE2TQ9NPD8 197 aaPredicted RBP3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 ASCL3Q9NQ33 180 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 DYRK4Q9NR20 520 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 DDIT4Q9NX09 232 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 RRN3Q9NYV6 651 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 VANGL2Q9ULK5 521 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 U3KQA8 63 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 NBASA2RRP1 2371 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 SCN8AQ9UQD0 1980 aa3.98□□□□□ -1.77
SNRNP40-205ENST00000486941 DOPEY2Q9Y3R5 2298 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 LRRK1Q38SD2 2015 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 IGLV3-10A0A075B6K4 115 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 SYNJ2BP-COX16A0A087WUM0 186 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 CXorf51AA0A1B0GTR3 108 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 ILVBLA1L0T0 632 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 CLEC18AA5D8T8 446 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 POM121BA6NF01 834 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 BECN2A8MW95 431 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 CDRT15L2A8MXV6 281 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 K7ERQ8 282 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 M0QYT0 321 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 KLK10O43240 276 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 TSPAN6O43657 245 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 SNAP91O60641 907 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 ZNF821O75541 412 aaPredicted RBP3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 DAB1O75553 588 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 TCEA3O75764 348 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 GRAP2O75791 330 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 NEBLO76041 1014 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 CNTN5O94779 1100 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 ADCY5O95622 1261 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 FGFR1OPO95684 399 aaKnown RBP3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 PAK4O96013 591 aaPredicted RBP3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 HRGP04196 525 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 RHOCP08134 193 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 RFPL3SP0C7P2 107 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 ADRB3P13945 408 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 TGM2P21980 687 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 RRM1P23921 792 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 MT3P25713 68 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 RBMS1P29558 406 aaKnown RBP3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 RABIFP47224 123 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 CXCR3P49682 368 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 NUMBP49757 651 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 NEK3P51956 506 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 CLDN2P57739 230 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 LTBQ06643 244 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 NME3Q13232 169 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 SGCGQ13326 291 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 KRTAP27-1Q3LI81 207 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 ALFQ53S48 1182 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 BRMS1LQ5PSV4 323 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 SEL1L3Q68CR1 1132 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 OR6B2Q6IFH4 312 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 RETSATQ6NUM9 610 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 ZNF474Q6S9Z5 364 aaPredicted RBP3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 LRRC31Q6UY01 552 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 SLC26A9Q7LBE3 791 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 C14orf80Q86SX3 495 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 PARGQ86W56 976 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 GPSM1Q86YR5 675 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 ZNF683Q8IZ20 524 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 SLC22A18ASQ8N1D0 253 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 PCDH20Q8N6Y1 951 aaKnown RBP3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 DCAF4L2Q8NA75 395 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 ATP11CQ8NB49 1132 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 CLEC18CQ8NCF0 446 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 C1orf131Q8NDD1 294 aaKnown RBP3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 WDR36Q8NI36 951 aaKnown RBP3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 NELFBQ8WX92 580 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 NT5C3BQ969T7 300 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 RAB7BQ96AH8 199 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 PGAP3Q96FM1 320 aaPredicted RBP3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 MED8Q96G25 268 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 PPP1R16AQ96I34 528 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 TBATAQ96M53 351 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 PSMB7Q99436 277 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 NPY6RQ99463 290 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 INTS2Q9H0H0 1204 aaKnown RBP3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 TKTL2Q9H0I9 626 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 RETREG1Q9H6L5 497 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 FZD3Q9NPG1 666 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 ACP6Q9NPH0 428 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 PIGVQ9NUD9 493 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 ARHGEF38Q9NXL2 777 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 COX16Q9P0S2 106 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 ZNF212Q9UDV6 495 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 IL36AQ9UHA7 158 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 IPO11Q9UI26 975 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms