RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 DNASE1L2Q92874 299 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 MAGIXQ9H6Y5 334 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 FARSBQ9NSD9 589 aaKnown RBP13.9□□□□□ -0.18
COL9A2-207ENST00000482722 TMEM45AQ9NWC5 275 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 TAS2R9Q9NYW1 312 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 TBC1D24Q9ULP9 559 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 CASP8AP2Q9UKL3 1982 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 F5H5T6 163 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 TLR5O60602 858 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 GUCA1CO95843 209 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 EFNA1P20827 205 aaPredicted RBP13.9□□□□□ -0.18
COL9A2-207ENST00000482722 TACR2P21452 398 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 HOXD10P28358 340 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 HOXA9P31269 272 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 DDOSTP39656 456 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 CREMQ03060 361 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 TIGD6Q17RP2 521 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 TBRG1Q3YBR2 411 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 ZDHHC21Q8IVQ6 265 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 SLC38A6Q8IZM9 456 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 MDGA1Q8NFP4 955 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 OR4F6Q8NGB9 312 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 OR51E2Q9H255 320 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 TLR8Q9NR97 1041 aaKnown RBP13.9□□□□□ -0.18
COL9A2-207ENST00000482722 FNIP2Q9P278 1114 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 FKBPLQ9UIM3 349 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 NDRG4Q9ULP0 352 aaKnown RBP13.9□□□□□ -0.18
COL9A2-207ENST00000482722 ABCG2Q9UNQ0 655 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 USP34Q70CQ2 3546 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 PCM1Q15154 2024 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 IGLV3-10A0A075B6K4 115 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 ZSCAN5BA6NJL1 495 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 E5RI56 91 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 CBX4O00257 560 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 PCDHGA12O60330 932 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 RETP07949 1114 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 MYCLP1P12525 358 aaPredicted RBP13.89□□□□□ -0.19
COL9A2-207ENST00000482722 SLC15A1P46059 708 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 NRIP1P48552 1158 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 NKX3-2P78367 333 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 GPR50Q13585 617 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 SPANXN2Q5MJ10 180 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 KDM4DQ6B0I6 523 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 ANKRD46Q86W74 232 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 PYURFQ96I23 114 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 POPDC3Q9HBV1 291 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 RAPGEFL1Q9UHV5 662 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 TRMT6Q9UJA5 497 aaKnown RBP13.89□□□□□ -0.19
COL9A2-207ENST00000482722 ERVW-1Q9UQF0 538 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 BTBD3Q9Y2F9 522 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 CAPN5O15484 640 aaPredicted RBP13.89□□□□□ -0.19
COL9A2-207ENST00000482722 TSPAN12O95859 305 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 OGNP20774 298 aaKnown RBP13.89□□□□□ -0.19
COL9A2-207ENST00000482722 ACVR1Q04771 509 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 FAM214AQ32MH5 1076 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 ZNF438Q7Z4V0 828 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 OR52E4Q8NGH9 312 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 GPR150Q8NGU9 434 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 APH1BQ8WW43 257 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 IPCEF1Q8WWN9 437 aaPredicted RBP13.89□□□□□ -0.19
COL9A2-207ENST00000482722 RASSF5Q8WWW0 418 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 JPH3Q8WXH2 748 aaPredicted RBP13.89□□□□□ -0.19
COL9A2-207ENST00000482722 CENPOQ9BU64 300 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 GIMAP4Q9NUV9 329 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 MKLN1Q9UL63 735 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 PEX16Q9Y5Y5 336 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 ZFP37Q9Y6Q3 630 aaPredicted RBP13.89□□□□□ -0.19
COL9A2-207ENST00000482722 CHD9Q3L8U1 2897 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.89□□□□□ -0.19
COL9A2-207ENST00000482722 KRT87PA6NCN2 255 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 STX16O14662 325 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 MRPS14O60783 128 aaKnown RBP13.89□□□□□ -0.19
COL9A2-207ENST00000482722 SEC22BO75396 215 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 SNX4O95219 450 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 VNN2O95498 520 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 ZNF682O95780 498 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 C1QCP02747 245 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 SELPP16109 830 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 SLC6A4P31645 630 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 MC4RP32245 332 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 GDF5P43026 501 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 GPLD1P80108 840 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 LINGO4Q6UY18 593 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 ZNF517Q6ZMY9 492 aaPredicted RBP13.89□□□□□ -0.19
COL9A2-207ENST00000482722 OR8H2Q8N162 312 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 DEPDC4Q8N2C3 294 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 TADA1Q96BN2 335 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 C8orf48Q96LL4 319 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 CASD1Q96PB1 797 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 GDF15Q99988 308 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 COPS4Q9BT78 406 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 GABARAPL1Q9H0R8 117 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 AMBNQ9NP70 447 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 MARCH5Q9NX47 278 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 CCDC59Q9P031 241 aaKnown RBP13.89□□□□□ -0.19
COL9A2-207ENST00000482722 LRFN2Q9ULH4 789 aa13.89□□□□□ -0.19
COL9A2-207ENST00000482722 IFRD1O00458 451 aaPredicted RBP13.88□□□□□ -0.19
COL9A2-207ENST00000482722 VPS26AO75436 327 aa13.88□□□□□ -0.19
COL9A2-207ENST00000482722 EOMESO95936 686 aa13.88□□□□□ -0.19
COL9A2-207ENST00000482722 MAGEA11P43364 429 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms