RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	HSPB3	Q12988	150 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	CHAF1B	Q13112	559 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	PTPN14	Q15678	1187 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	PHKG1	Q16816	387 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	C15orf59	Q2T9L4	293 aa	Predicted RBP	2.55	□□□□□ -2
CCNL1-223	ENST00000481173	GON4L	Q3T8J9	2241 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	RNF212	Q495C1	297 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	GPR33	Q49SQ1	333 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	MYH14	Q7Z406	1995 aa	Known RBP	2.55	□□□□□ -2
CCNL1-223	ENST00000481173	SLC25A42	Q86VD7	318 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	KRTAP11-1	Q8IUC1	163 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	TAGAP	Q8N103	731 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	OR4K1	Q8NGD4	311 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	OR10Q1	Q8NGQ4	319 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	C9orf43	Q8TAL5	461 aa	Predicted RBP	2.55	□□□□□ -2
CCNL1-223	ENST00000481173	CALML4	Q96GE6	196 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	FAM71F1	Q96KD3	344 aa	Predicted RBP	2.55	□□□□□ -2
CCNL1-223	ENST00000481173	ABCB10	Q9NRK6	738 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	STK26	Q9P289	416 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	CRNN	Q9UBG3	495 aa	Predicted RBP	2.55	□□□□□ -2
CCNL1-223	ENST00000481173	TBC1D29	Q9UFV1	150 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	PA2G4	Q9UQ80	394 aa	Known RBP	2.55	□□□□□ -2
CCNL1-223	ENST00000481173	CHKB	Q9Y259	395 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	WIPI2	Q9Y4P8	454 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	STYXL1	Q9Y6J8	313 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	ITIH6	Q6UXX5	1313 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	TRBV4-1	A0A0J9YWV2	114 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	TRBV5-5	A0A0J9YX44	114 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	hCG_1807616	A0A1W2PRN6	198 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	HOXD4	P09016	255 aa	Predicted RBP	2.54	□□□□□ -2
CCNL1-223	ENST00000481173	BCL3	P20749	454 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	ALDH1B1	P30837	517 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	PTGER4	P35408	488 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	ZNF75D	P51815	510 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	MYL7	Q01449	175 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	DHODH	Q02127	395 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	FCHO2	Q0JRZ9	810 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	TAB1	Q15750	504 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	NTRK2	Q16620	822 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	CBWD6	Q4V339	395 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	RILPL1	Q5EBL4	403 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	CBWD3	Q5JTY5	395 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	C6orf163	Q5TEZ5	329 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	FAM205BP	Q63HN1	556 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	LCLAT1	Q6UWP7	414 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	ZNF841	Q6ZN19	808 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	C4orf50	Q6ZRC1	276 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	ZER1	Q7Z7L7	766 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	ZFAND4	Q86XD8	727 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	MINDY1	Q8N5J2	469 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	2.54	□□□□□ -2
CCNL1-223	ENST00000481173	TEX19	Q8NA77	164 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	OR10S1	Q8NGN2	331 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	CFAP61	Q8NHU2	1237 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	TOMM40L	Q969M1	308 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	ZNF622	Q969S3	477 aa	Known RBP eCLIP	2.54	□□□□□ -2	8e-12	■■□□□ 14.4
CCNL1-223	ENST00000481173	TMCO6	Q96DC7	493 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	LGMN	Q99538	433 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	SEPHS2	Q99611	448 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	MAP3K3	Q99759	626 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	OVOL2	Q9BRP0	275 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	TEX12	Q9BXU0	123 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	ZMYND12	Q9H0C1	365 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	ZHX3	Q9H4I2	956 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	GPN1	Q9HCN4	374 aa	Predicted RBP	2.54	□□□□□ -2
CCNL1-223	ENST00000481173	BLOC1S4	Q9NUP1	217 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	GIMAP4	Q9NUV9	329 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	PRMT7	Q9NVM4	692 aa	Predicted RBP	2.54	□□□□□ -2
CCNL1-223	ENST00000481173	GDE1	Q9NZC3	331 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	BAIAP2L1	Q9UHR4	511 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	PCDHGB4	Q9UN71	923 aa		2.54	□□□□□ -2
CCNL1-223	ENST00000481173	SHISA7	A6NL88	538 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173		G3V2L1	256 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	SNAP91	O60641	907 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	KRTAP5-8	O75690	187 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	CEACAM4	O75871	244 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	TSPAN9	O75954	239 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	ATP1B1	P05026	303 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	IRF2	P14316	349 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	ELAVL4	P26378	380 aa	Known RBP	2.53	□□□□□ -2
CCNL1-223	ENST00000481173	RXRG	P48443	463 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	VAMP7	P51809	220 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	IRX4	P78413	519 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	KLC1	Q07866	573 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	ITGA7	Q13683	1181 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	WTAP	Q15007	396 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	EIPR1	Q53HC9	387 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	GARNL3	Q5VVW2	1013 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	CDHR3	Q6ZTQ4	885 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	TIPARP	Q7Z3E1	657 aa	Known RBP	2.53	□□□□□ -2
CCNL1-223	ENST00000481173	CEACAM19	Q7Z692	300 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	FAM131B	Q86XD5	332 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	OR5T2	Q8NGG2	359 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	NPRL2	Q8WTW4	380 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	JAKMIP2	Q96AA8	810 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	SKA1	Q96BD8	255 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	RSRC1	Q96IZ7	334 aa	Known RBP	2.53	□□□□□ -2
CCNL1-223	ENST00000481173	ZNF597	Q96LX8	424 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	CHCHD5	Q9BSY4	110 aa		2.53	□□□□□ -2
CCNL1-223	ENST00000481173	PANK2	Q9BZ23	570 aa		2.53	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms