RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	MMP21	Q8N119	569 aa		14.97	□□□□□ -0.01
HDLBP-238	ENST00000479894	AGGF1	Q8N302	714 aa	eCLIP	14.97	□□□□□ -0.01
HDLBP-238	ENST00000479894	BEND7	Q8N7W2	519 aa	Predicted RBP	14.97	□□□□□ -0.01
HDLBP-238	ENST00000479894	OR2Y1	Q8NGV0	311 aa		14.97	□□□□□ -0.01
HDLBP-238	ENST00000479894	AGAP4	Q96P64	663 aa		14.97	□□□□□ -0.01
HDLBP-238	ENST00000479894	GBP5	Q96PP8	586 aa		14.97	□□□□□ -0.01
HDLBP-238	ENST00000479894	CYTH2	Q99418	400 aa		14.97	□□□□□ -0.01
HDLBP-238	ENST00000479894	TRIM56	Q9BRZ2	755 aa	Known RBP	14.97	□□□□□ -0.01
HDLBP-238	ENST00000479894	GNPTG	Q9UJJ9	305 aa		14.97	□□□□□ -0.01
HDLBP-238	ENST00000479894		E7EQ34	232 aa		14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894	AGPS	O00116	658 aa		14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894	MATN2	O00339	956 aa		14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894	BANF1	O75531	89 aa		14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894	AGA	P20933	346 aa		14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894	RPS3	P23396	243 aa	Known RBP eCLIP	14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894	ECHS1	P30084	290 aa		14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894	TDGF1P3	P51864	188 aa		14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894	KRTAP10-9	P60411	292 aa		14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894	DBN1	Q16643	649 aa		14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894	CYP2A13	Q16696	494 aa		14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	14.96	□□□□□ -0.01	2e-11	■■■□□ 15.3
HDLBP-238	ENST00000479894	BCL7A	Q4VC05	210 aa		14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894	TRAPPC5	Q8IUR0	188 aa		14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894	IGDCC3	Q8IVU1	814 aa		14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894	PIANP	Q8IYJ0	282 aa		14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894	PTER	Q96BW5	349 aa		14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894	PANX3	Q96QZ0	392 aa		14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894	FAM96A	Q9H5X1	160 aa		14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894	EPS8L2	Q9H6S3	715 aa		14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894	IARS2	Q9NSE4	1012 aa	Known RBP	14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894	FBXO5	Q9UKT4	447 aa		14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894	PTRH2	Q9Y3E5	179 aa	Known RBP	14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894	IKBKG	Q9Y6K9	419 aa		14.96	□□□□□ -0.01
HDLBP-238	ENST00000479894		A0A087WUV0	522 aa	Predicted RBP	14.95	□□□□□ -0.02
HDLBP-238	ENST00000479894	C17orf113	A0A1B0GUU1	675 aa		14.95	□□□□□ -0.02
HDLBP-238	ENST00000479894	CCL21	O00585	134 aa		14.95	□□□□□ -0.02
HDLBP-238	ENST00000479894	MTX2	O75431	263 aa		14.95	□□□□□ -0.02
HDLBP-238	ENST00000479894	MTHFD1	P11586	935 aa	Known RBP	14.95	□□□□□ -0.02
HDLBP-238	ENST00000479894	ARNT	P27540	789 aa		14.95	□□□□□ -0.02
HDLBP-238	ENST00000479894	PREP	P48147	710 aa		14.95	□□□□□ -0.02
HDLBP-238	ENST00000479894	FASTKD3	Q14CZ7	662 aa	Known RBP	14.95	□□□□□ -0.02
HDLBP-238	ENST00000479894	KLHL38	Q2WGJ6	581 aa		14.95	□□□□□ -0.02
HDLBP-238	ENST00000479894	MLIP	Q5VWP3	458 aa		14.95	□□□□□ -0.02
HDLBP-238	ENST00000479894	PTRHD1	Q6GMV3	140 aa	Known RBP	14.95	□□□□□ -0.02
HDLBP-238	ENST00000479894	DUS1L	Q6P1R4	473 aa	Known RBP	14.95	□□□□□ -0.02
HDLBP-238	ENST00000479894	PPP1R32	Q7Z5V6	425 aa		14.95	□□□□□ -0.02
HDLBP-238	ENST00000479894	AMZ2	Q86W34	360 aa		14.95	□□□□□ -0.02
HDLBP-238	ENST00000479894	PARD6B	Q9BYG5	372 aa		14.95	□□□□□ -0.02
HDLBP-238	ENST00000479894	PPCS	Q9HAB8	311 aa		14.95	□□□□□ -0.02
HDLBP-238	ENST00000479894	GPN3	Q9UHW5	284 aa	Predicted RBP	14.95	□□□□□ -0.02
HDLBP-238	ENST00000479894	POMT2	Q9UKY4	750 aa		14.95	□□□□□ -0.02
HDLBP-238	ENST00000479894	RAB21	Q9UL25	225 aa		14.95	□□□□□ -0.02
HDLBP-238	ENST00000479894	ZNF469	Q96JG9	3925 aa	Predicted RBP	14.95	□□□□□ -0.02
HDLBP-238	ENST00000479894	TCRBV9S1A1T	A0A576	114 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	OR6C74	A6NCV1	312 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	OR51F1	A6NGY5	319 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	MAP3K7	O43318	606 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	ZNF749	O43361	778 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	ABHD2	P08910	425 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	ERVK-10	P10266	1014 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	CDH3	P22223	829 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	SSTR1	P30872	391 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	SKIV2L2	P42285	1042 aa	Known RBP	14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	KCNK10	P57789	538 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	PRKAA1	Q13131	559 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	TMED2	Q15363	201 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	INA	Q16352	499 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	KHDC1	Q4VXA5	237 aa	Known RBP	14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	IRAK1BP1	Q5VVH5	260 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	PRAMEF13	Q5VWM6	474 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	UGT3A1	Q6NUS8	523 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	TMEM220	Q6QAJ8	160 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	TAOK1	Q7L7X3	1001 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	RASGEF1A	Q8N9B8	481 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	C2CD4A	Q8NCU7	369 aa	Predicted RBP	14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	NR4A3	Q92570	626 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	CNDP1	Q96KN2	507 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	LINC00615	Q96LM1	132 aa	Predicted RBP	14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	CPNE1	Q99829	537 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	CCM2	Q9BSQ5	444 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	CDC42EP4	Q9H3Q1	356 aa	Known RBP	14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	MCCC2	Q9HCC0	563 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	RRAGD	Q9NQL2	400 aa	Predicted RBP	14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	NINJ2	Q9NZG7	142 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	TMPRSS11E	Q9UL52	423 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	AP1M2	Q9Y6Q5	423 aa		14.94	□□□□□ -0.02
HDLBP-238	ENST00000479894	TRGV8	A0A0C4DH27	118 aa		14.93	□□□□□ -0.02
HDLBP-238	ENST00000479894	FAM221A	A4D161	298 aa		14.93	□□□□□ -0.02
HDLBP-238	ENST00000479894	MGAT4D	A6NG13	374 aa		14.93	□□□□□ -0.02
HDLBP-238	ENST00000479894	S1PR4	O95977	384 aa		14.93	□□□□□ -0.02
HDLBP-238	ENST00000479894	CA7	P43166	264 aa		14.93	□□□□□ -0.02
HDLBP-238	ENST00000479894	CD151	P48509	253 aa		14.93	□□□□□ -0.02
HDLBP-238	ENST00000479894	PRLHR	P49683	370 aa		14.93	□□□□□ -0.02
HDLBP-238	ENST00000479894	CSE1L	P55060	971 aa	Known RBP	14.93	□□□□□ -0.02
HDLBP-238	ENST00000479894	VSNL1	P62760	191 aa		14.93	□□□□□ -0.02
HDLBP-238	ENST00000479894	RPA4	Q13156	261 aa		14.93	□□□□□ -0.02
HDLBP-238	ENST00000479894	BRD3	Q15059	726 aa		14.93	□□□□□ -0.02
HDLBP-238	ENST00000479894	TEDDM1	Q5T9Z0	273 aa		14.93	□□□□□ -0.02
HDLBP-238	ENST00000479894	LGSN	Q5TDP6	509 aa		14.93	□□□□□ -0.02
HDLBP-238	ENST00000479894	FBXO38	Q6PIJ6	1188 aa		14.93	□□□□□ -0.02

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