RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 MTFMTQ96DP5 389 aaKnown RBP11.83□□□□□ -0.52
PTPRF-212ENST00000477970 FAM120BQ96EK7 910 aaKnown RBP11.83□□□□□ -0.52
PTPRF-212ENST00000477970 COL4A3Q01955 1670 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 RANBP2P49792 3224 aaKnown RBP11.83□□□□□ -0.52
PTPRF-212ENST00000477970 LRRK1Q38SD2 2015 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 A0A1B0GTW7 788 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 C17orf113A0A1B0GUU1 675 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 SCN2BO60939 215 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 CCNDBP1O95273 360 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 EPCAMP16422 314 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 TACR1P25103 407 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 HALP42357 657 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 KIR3DL1P43629 444 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 ASMTP46597 345 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 EIF4HQ15056 248 aaKnown RBP11.83□□□□□ -0.52
PTPRF-212ENST00000477970 MYLIPQ8WY64 445 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 FAM162AQ96A26 154 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 AP2M1Q96CW1 435 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 FOPNLQ96NB1 174 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 GABARAPL1Q9H0R8 117 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 EHD1Q9H4M9 534 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 SLC6A13Q9NSD5 602 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 DDX18Q9NVP1 670 aaKnown RBP11.83□□□□□ -0.52
PTPRF-212ENST00000477970 RSL24D1Q9UHA3 163 aaKnown RBP11.83□□□□□ -0.52
PTPRF-212ENST00000477970 SOD1P00441 154 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 ALBP02768 609 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 THRBP10828 461 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 GPX2P18283 190 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 ITPKAP23677 461 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 WNT3P56703 355 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 ST8SIA6P61647 398 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 PPP2R2BQ00005 443 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 CAMK1Q14012 370 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 NKG7Q16617 165 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 ZBED5Q49AG3 693 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 ZC3H12BQ5HYM0 836 aaKnown RBP11.83□□□□□ -0.52
PTPRF-212ENST00000477970 NAIF1Q69YI7 327 aaPredicted RBP11.83□□□□□ -0.52
PTPRF-212ENST00000477970 ENPP6Q6UWR7 440 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 ZDHHC13Q8IUH4 622 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 ADHFE1Q8IWW8 467 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 OR5K1Q8NHB7 308 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 REPS1Q96D71 796 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 RBM4BQ9BQ04 359 aaKnown RBP11.83□□□□□ -0.52
PTPRF-212ENST00000477970 TUBA1CQ9BQE3 449 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 RBM4Q9BWF3 364 aaKnown RBP11.83□□□□□ -0.52
PTPRF-212ENST00000477970 PIF1Q9H611 641 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 THG1LQ9NWX6 298 aaKnown RBP11.83□□□□□ -0.52
PTPRF-212ENST00000477970 LIMD1Q9UGP4 676 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 BTNL2Q9UIR0 455 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 SAMD4AQ9UPU9 718 aaKnown RBP11.83□□□□□ -0.52
PTPRF-212ENST00000477970 MTCH2Q9Y6C9 303 aa11.83□□□□□ -0.52
PTPRF-212ENST00000477970 EDDM13A0A1B0GTR0 161 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 DPM1O60762 260 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 MTX2O75431 263 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 SEMG1P04279 462 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 FOSL2P15408 326 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 IMPA1P29218 277 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 NEK2P51955 445 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 CTSCP53634 463 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 DOC2AQ14183 400 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 COL19A1Q14993 1142 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 UGT8Q16880 541 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 TMEM52BQ4KMG9 183 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 SPIN4Q56A73 249 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 CPZQ66K79 652 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 GRASPQ7Z6J2 395 aaPredicted RBP11.82□□□□□ -0.52
PTPRF-212ENST00000477970 TERB1Q8NA31 727 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 CYGBQ8WWM9 190 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 PYCR2Q96C36 320 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 SDCCAG3Q96C92 435 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 ZNF514Q96K75 400 aaPredicted RBP11.82□□□□□ -0.52
PTPRF-212ENST00000477970 DOCK6Q96HP0 2047 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 TMEM202A6NGA9 273 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 G3V2T6 193 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 RFXANKO14593 260 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 SNAP29O95721 258 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 ABCB1P08183 1280 aaPredicted RBP11.82□□□□□ -0.52
PTPRF-212ENST00000477970 HLCSP50747 726 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 NTHL1P78549 312 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 GTDC1Q4AE62 458 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 XKR6Q5GH73 641 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 TTC23Q5W5X9 447 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 GALNT18Q6P9A2 607 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 ZNF786Q8N393 782 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 CLHC1Q8NHS4 586 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 CHTF18Q8WVB6 975 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 SORCS1Q8WY21 1168 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 PYURFQ96I23 114 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 FBXL20Q96IG2 436 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 APOLD1Q96LR9 279 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 OR4K3Q96R72 315 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 PKP4Q99569 1192 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 INPP5KQ9BT40 448 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 CORO2BQ9UQ03 480 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 HCFC2Q9Y5Z7 792 aa11.82□□□□□ -0.52
PTPRF-212ENST00000477970 OR2AG2A6NM03 316 aa11.81□□□□□ -0.52
PTPRF-212ENST00000477970 E7EQ34 232 aa11.81□□□□□ -0.52
PTPRF-212ENST00000477970 FOXE1O00358 373 aaPredicted RBP11.81□□□□□ -0.52
PTPRF-212ENST00000477970 MYO1DO94832 1006 aa11.81□□□□□ -0.52
PTPRF-212ENST00000477970 PPIBP23284 216 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms