RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 BIRC2Q13490 618 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 RFX4Q33E94 735 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 COL13A1Q5TAT6 717 aaPredicted RBP15.95■□□□□ 0.14
TMEM53-208ENST00000476724 SYCE2Q6PIF2 218 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 ZNF773Q6PK81 442 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 DHRS4L2Q6PKH6 230 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 KCTD8Q6ZWB6 473 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 HSD11B1LQ7Z5J1 315 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 SERPINA11Q86U17 422 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 HCAR2Q8TDS4 363 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 STARD8Q92502 1023 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 SMARCD2Q92925 531 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 MRPL38Q96DV4 380 aaKnown RBP15.95■□□□□ 0.14
TMEM53-208ENST00000476724 PYURFQ96I23 114 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 LRIG1Q96JA1 1093 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 MRGPRX3Q96LB0 322 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 APOLD1Q96LR9 279 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 DOK1Q99704 481 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 POLR1BQ9H9Y6 1135 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 SLC6A13Q9NSD5 602 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 FAM118AQ9NWS6 357 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 C3orf18Q9UK00 162 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 FBXO10Q9UK96 956 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 PPT2Q9UMR5 302 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 UPK3BL1B0FP48 263 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 UPK3BL2E5RIL1 263 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 SGTAO43765 313 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 PSIP1O75475 530 aaKnown RBP15.95■□□□□ 0.14
TMEM53-208ENST00000476724 CCNDBP1O95273 360 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 SERPINA1P01009 418 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 CDK4P11802 303 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 HSD3B1P14060 373 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 JUNBP17275 347 aaPredicted RBP15.95■□□□□ 0.14
TMEM53-208ENST00000476724 TACR1P25103 407 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 HSD3B2P26439 372 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 DCKP27707 260 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 PCDH1Q08174 1060 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 PMS2P3Q13401 168 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 LDLRAP1Q5SW96 308 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 SERPINA13PQ6UXR4 307 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 HIPK1Q86Z02 1210 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 PGBD3Q8N328 593 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 NETO1Q8TDF5 533 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 HDAC2Q92769 488 aaKnown RBP15.95■□□□□ 0.14
TMEM53-208ENST00000476724 NELL1Q92832 810 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 SCAMP4Q969E2 229 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 TBC1D20Q96BZ9 403 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 C12orf43Q96C57 262 aaKnown RBP15.95■□□□□ 0.14
TMEM53-208ENST00000476724 INPP5KQ9BT40 448 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 TOR3AQ9H497 397 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 MTG2Q9H4K7 406 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 TMEM9Q9P0T7 183 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 CDH7Q9ULB5 785 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 SAMD4AQ9UPU9 718 aaKnown RBP15.95■□□□□ 0.14
TMEM53-208ENST00000476724 MAPRE3Q9UPY8 281 aa15.95■□□□□ 0.14
TMEM53-208ENST00000476724 PLXNA2O75051 1894 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 KIF26AQ9ULI4 1882 aaPredicted RBP15.94■□□□□ 0.14
TMEM53-208ENST00000476724 COL4A3Q01955 1670 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 HEPACAM2A8MVW5 462 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 TTC34A8MYJ7 566 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 PRAMEF4O60810 478 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 CPNE6O95741 557 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 ITPKAP23677 461 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 FCARP24071 287 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 HNF4AP41235 474 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 C21orf58P58505 322 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 GRSF1Q12849 480 aaKnown RBP eCLIP15.94■□□□□ 0.14
TMEM53-208ENST00000476724 RAB39AQ14964 217 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 DUOXA1Q1HG43 343 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 ZNF284Q2VY69 593 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 LRRC73Q5JTD7 316 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 HENMT1Q5T8I9 393 aaKnown RBP15.94■□□□□ 0.14
TMEM53-208ENST00000476724 BROXQ5VW32 411 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 PRAMEF9Q5VWM5 478 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 ERICH5Q6P6B1 374 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 Q6ZVL8 140 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 KLHDC8AQ8IYD2 350 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 CCDC138Q96M89 665 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 VPS35Q96QK1 796 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 CDCA3Q99618 268 aaPredicted RBP15.94■□□□□ 0.14
TMEM53-208ENST00000476724 ATG10Q9H0Y0 220 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 DZANK1Q9NVP4 752 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 THG1LQ9NWX6 298 aaKnown RBP15.94■□□□□ 0.14
TMEM53-208ENST00000476724 VPS29Q9UBQ0 182 aa15.94■□□□□ 0.14
TMEM53-208ENST00000476724 RUVBL1Q9Y265 456 aaKnown RBP15.94■□□□□ 0.14
TMEM53-208ENST00000476724 MAGED1Q9Y5V3 778 aaPredicted RBP15.94■□□□□ 0.14
TMEM53-208ENST00000476724 LEFTY1O75610 366 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 SLC6A11P48066 632 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 DGKGP49619 791 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 VASPP50552 380 aaPredicted RBP15.93■□□□□ 0.14
TMEM53-208ENST00000476724 VAC14Q08AM6 782 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 TOP3AQ13472 1001 aaPredicted RBP15.93■□□□□ 0.14
TMEM53-208ENST00000476724 DCTN2Q13561 401 aaKnown RBP15.93■□□□□ 0.14
TMEM53-208ENST00000476724 TUBA3CQ13748 450 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 ZC3H12BQ5HYM0 836 aaKnown RBP15.93■□□□□ 0.14
TMEM53-208ENST00000476724 ARHGAP22Q7Z5H3 698 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 SYT12Q8IV01 421 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 WDR20Q8TBZ3 569 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 FRS2Q8WU20 508 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 BTN2A2Q8WVV5 523 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms