RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 ABI1Q8IZP0 508 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 HS3ST5Q8IZT8 346 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 SIMC1Q8NDZ2 872 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 SH3RF2Q8TEC5 729 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 PDGFDQ9GZP0 370 aaPredicted RBP5.95□□□□□ -1.46
HERC4-209ENST00000473533 TMEM245Q9H330 911 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 NSUN3Q9H649 340 aaKnown RBP5.95□□□□□ -1.46
HERC4-209ENST00000473533 SEC14L4Q9UDX3 406 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 NEUROG3Q9Y4Z2 214 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 PCDHGB6Q9Y5F9 930 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 MEIS3P2A8K0S8 358 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 CENPXA8MT69 81 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 FFAR3O14843 346 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 GPR42O15529 346 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 SLC25A14O95258 325 aaPredicted RBP5.95□□□□□ -1.46
HERC4-209ENST00000473533 GUCA1CO95843 209 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 SEMG1P04279 462 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 ABCB1P08183 1280 aaPredicted RBP5.95□□□□□ -1.46
HERC4-209ENST00000473533 MPC1LP0DKB6 136 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 DBTP11182 482 aaKnown RBP5.95□□□□□ -1.46
HERC4-209ENST00000473533 HNF4AP41235 474 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 MRPS15P82914 257 aaKnown RBP5.95□□□□□ -1.46
HERC4-209ENST00000473533 TAF10Q12962 218 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 ARHGEF7Q14155 803 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 IHHQ14623 411 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 COLEC12Q5KU26 742 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 STEAP3Q658P3 488 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 XKRXQ6PP77 449 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 CD300LGQ6UXG3 332 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 TMEM179BQ7Z7N9 219 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 SERPINA9Q86WD7 417 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 L3MBTL4Q8NA19 623 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 C11orf65Q8NCR3 313 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 OR8J2Q8NGG1 315 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 ZNF675Q8TD23 568 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 CAPSLQ8WWF8 208 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 HTRA1Q92743 480 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 HSH2DQ96JZ2 352 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 ADAM2Q99965 735 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 CLN6Q9NWW5 311 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 CACNG4Q9UBN1 327 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 ZNF282Q9UDV7 671 aaPredicted RBP5.95□□□□□ -1.46
HERC4-209ENST00000473533 BTNL2Q9UIR0 455 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 BRCA2P51587 3418 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 LOC730098B7Z3J9 87 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 OR1I1O60431 355 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 UGT2B17O75795 530 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 DDNO94850 711 aaPredicted RBP5.94□□□□□ -1.46
HERC4-209ENST00000473533 SLITRK5O94991 958 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 PRAMEF1O95521 474 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 OR56A5P0C7T3 313 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 ZDHHC11BP0C7U3 371 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 CYP4B1P13584 511 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 PCGF2P35227 344 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 SPAM1P38567 509 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 NSG1P42857 185 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 SLC15A1P46059 708 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 RHOAP61586 193 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 IFITM3Q01628 133 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 TWF1Q12792 350 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 SGO1Q5FBB7 561 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 FBXO48Q5FWF7 155 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 LIPJQ5W064 366 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 KIAA1841Q6NSI8 718 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 DNAJB7Q7Z6W7 309 aaPredicted RBP5.94□□□□□ -1.46
HERC4-209ENST00000473533 RAB43Q86YS6 212 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 SYTL1Q8IYJ3 562 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 DNAJC22Q8N4W6 341 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 OR7D4Q8NG98 312 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 HASPINQ8TF76 798 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 SGCDQ92629 289 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 ESAMQ96AP7 390 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 SLX1AQ9BQ83 275 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 PAAF1Q9BRP4 392 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 SLA2Q9H6Q3 261 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 ASB8Q9H765 288 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 SERHLQ9NQF3 203 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 FKBP14Q9NWM8 211 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 ARL15Q9NXU5 204 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 EHD3Q9NZN3 535 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 VPS4AQ9UN37 437 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 DUSP12Q9UNI6 340 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 PCDHB11Q9Y5F2 797 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 PCDHGB2Q9Y5G2 931 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 A0A1W2PQ67 120 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 IRGMA1A4Y4 181 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 ARRDC5A6NEK1 342 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 CBX4O00257 560 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 TNFRSF11BO00300 401 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 QSOX1O00391 747 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 TAPBPO15533 448 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 ARHGEF9O43307 516 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 MITFO75030 526 aaPredicted RBP5.94□□□□□ -1.46
HERC4-209ENST00000473533 SOCS5O75159 536 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 TRIM3O75382 744 aaPredicted RBP5.94□□□□□ -1.46
HERC4-209ENST00000473533 PGLSO95336 258 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 PRLP01236 227 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 CTSHP09668 335 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 PIPP12273 146 aaPredicted RBP5.94□□□□□ -1.46
HERC4-209ENST00000473533 MYCLP1P12525 358 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 270 ms