RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 CCDC83Q8IWF9 413 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 DDIASQ8IXT1 998 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 WIPF2Q8TF74 440 aaPredicted RBP4.8□□□□□ -1.64
COPS3-204ENST00000462236 HTR3CQ8WXA8 447 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 COQ8BQ96D53 544 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 SGF29Q96ES7 293 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 CALML4Q96GE6 196 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 ATXN7L3BQ96GX2 97 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 SERAC1Q96JX3 654 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 APOLD1Q96LR9 279 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 TMEM79Q9BSE2 394 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 IFT27Q9BW83 186 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 QTRT1Q9BXR0 403 aaKnown RBP4.8□□□□□ -1.64
COPS3-204ENST00000462236 CTDSP1Q9GZU7 261 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 SLC25A18Q9H1K4 315 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 ADNPQ9H2P0 1102 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 ACTR5Q9H9F9 607 aaPredicted RBP4.8□□□□□ -1.64
COPS3-204ENST00000462236 ABCB8Q9NUT2 735 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 BEX4Q9NWD9 120 aaPredicted RBP4.8□□□□□ -1.64
COPS3-204ENST00000462236 NLGN3Q9NZ94 848 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 UPB1Q9UBR1 384 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 HMGXB4Q9UGU5 601 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 CYTH4Q9UIA0 394 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 GGA2Q9UJY4 613 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 PLA2G4CQ9UP65 541 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 DHDHQ9UQ10 334 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 LAMP3Q9UQV4 416 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 NCKAP1Q9Y2A7 1128 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 TACC2O95359 2948 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 AKAP6Q13023 2319 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 DCHS2Q6V1P9 2916 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 TRBV5-3A0A0A0MS03 114 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 TARSL2A2RTX5 802 aaKnown RBP4.79□□□□□ -1.64
COPS3-204ENST00000462236 EME2A4GXA9 379 aaPredicted RBP4.79□□□□□ -1.64
COPS3-204ENST00000462236 A6NLC8 198 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 NTN3O00634 580 aaPredicted RBP4.79□□□□□ -1.64
COPS3-204ENST00000462236 SCAMP1O15126 338 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 CASC3O15234 703 aaKnown RBP4.79□□□□□ -1.64
COPS3-204ENST00000462236 PLRG1O43660 514 aaKnown RBP4.79□□□□□ -1.64
COPS3-204ENST00000462236 SDC3O75056 442 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 NEURL1O76050 574 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 PRR35P0CG20 571 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 RBMS1P29558 406 aaKnown RBP4.79□□□□□ -1.64
COPS3-204ENST00000462236 CD70P32970 193 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 LONP1P36776 959 aaKnown RBP4.79□□□□□ -1.64
COPS3-204ENST00000462236 SGSHP51688 502 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 RIPPLY3P57055 190 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 C21orf58P58505 322 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 TNNC1P63316 161 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 IRX6P78412 446 aaPredicted RBP4.79□□□□□ -1.64
COPS3-204ENST00000462236 CYP24A1Q07973 514 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 INCA1Q0VD86 236 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 IL13RA2Q14627 380 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 GPR68Q15743 365 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 IGFBP7Q16270 282 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 ZSCAN23Q3MJ62 389 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 MIDNQ504T8 468 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 MPPE1Q53F39 396 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 SLC45A4Q5BKX6 768 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 RAB41Q5JT25 222 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 MPP7Q5T2T1 576 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 AAGABQ6PD74 315 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 ADGRG6Q86SQ4 1221 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 ACOT1Q86TX2 421 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 UNC93AQ86WB7 457 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 TICAM1Q8IUC6 712 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 ZDHHC23Q8IYP9 409 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 C12orf29Q8N999 325 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 SCAIQ8N9R8 606 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 PCYOX1LQ8NBM8 494 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 SETD9Q8NE22 299 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 PRSS3P2Q8NHM4 247 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 WDR36Q8NI36 951 aaKnown RBP4.79□□□□□ -1.64
COPS3-204ENST00000462236 ZNF564Q8TBZ8 553 aaPredicted RBP4.79□□□□□ -1.64
COPS3-204ENST00000462236 SLC2A14Q8TDB8 520 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 DDI1Q8WTU0 396 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 IGFBPL1Q8WX77 278 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 RAB40AQ8WXH6 277 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 ST8SIA4Q92187 359 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 CENPIQ92674 756 aaPredicted RBP4.79□□□□□ -1.64
COPS3-204ENST00000462236 SYAP1Q96A49 352 aaPredicted RBP4.79□□□□□ -1.64
COPS3-204ENST00000462236 MPP4Q96JB8 637 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 TRMOQ9BU70 441 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 NACA2Q9H009 215 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 INTS2Q9H0H0 1204 aaKnown RBP4.79□□□□□ -1.64
COPS3-204ENST00000462236 ZHX3Q9H4I2 956 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 MRPL44Q9H9J2 332 aaKnown RBP4.79□□□□□ -1.64
COPS3-204ENST00000462236 GRHL1Q9NZI5 618 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 SLC25A10Q9UBX3 287 aaPredicted RBP4.79□□□□□ -1.64
COPS3-204ENST00000462236 HSF4Q9ULV5 492 aa4.79□□□□□ -1.64
COPS3-204ENST00000462236 NIPBLQ6KC79 2804 aaeCLIP4.79□□□□□ -1.64
COPS3-204ENST00000462236 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.78□□□□□ -1.64
COPS3-204ENST00000462236 TCRBV7S3A2A0A539 114 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 CXorf65A6NEN9 183 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 GAGE12JA6NER3 117 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 FAM47DPA6NHR8 397 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 C17orf100A8MU93 164 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 PRAMEF26H0Y7S4 382 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 RHODO00212 210 aa4.78□□□□□ -1.64
COPS3-204ENST00000462236 SLC7A4O43246 635 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms