RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 LILRA6Q6PI73 481 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 RETREG3Q86VR2 466 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 SIRT2Q8IXJ6 389 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 NRMQ8IXM6 262 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 SPATA6LQ8N4H0 392 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 FIBCD1Q8N539 461 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 SYT14Q8NB59 555 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 OR1E3Q8WZA6 343 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 CAVIN3Q969G5 261 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 IFT43Q96FT9 208 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 FAHD2AQ96GK7 314 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 UTP23Q9BRU9 249 aaKnown RBP5.23□□□□□ -1.57
PTPN4-203ENST00000430976 GANQ9H2C0 597 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 C6orf50Q9HD87 102 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 CCNB1IP1Q9NPC3 277 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 CCM2LQ9NUG4 571 aaPredicted RBP5.23□□□□□ -1.57
PTPN4-203ENST00000430976 PGPEP1Q9NXJ5 209 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 KLHL8Q9P2G9 620 aaPredicted RBP5.23□□□□□ -1.57
PTPN4-203ENST00000430976 RNF14Q9UBS8 474 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 SEC14L3Q9UDX4 400 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 PTGDR2Q9Y5Y4 395 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 ANKRD30BQ9BXX2 1392 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 A0A0B4J293 547 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 CLCA1A8K7I4 914 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 CHP2O43745 196 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 CACNG3O60359 315 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 TM7SF2O76062 418 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 DEXIO95424 95 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 ALDOAP04075 364 aaKnown RBP5.23□□□□□ -1.57
PTPN4-203ENST00000430976 RLN2P04090 185 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 RPLP2P05387 115 aaKnown RBP5.23□□□□□ -1.57
PTPN4-203ENST00000430976 HOXB8P17481 243 aaPredicted RBP5.23□□□□□ -1.57
PTPN4-203ENST00000430976 ARRB1P49407 418 aaPredicted RBP5.23□□□□□ -1.57
PTPN4-203ENST00000430976 PLA2G16P53816 162 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 ATP5J2P56134 94 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 PTH1RQ03431 593 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 ITIH4Q14624 930 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 TRIP10Q15642 601 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 EML3Q32P44 896 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 RFTN2Q52LD8 501 aaPredicted RBP5.23□□□□□ -1.57
PTPN4-203ENST00000430976 ZNF789Q5FWF6 425 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 SLC16A12Q6ZSM3 486 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 SCN4BQ8IWT1 228 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 CELF5Q8N6W0 485 aaKnown RBP5.23□□□□□ -1.57
PTPN4-203ENST00000430976 POGLUT1Q8NBL1 392 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 ZFP28Q8NHY6 868 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 SLC7A14Q8TBB6 771 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 STK35Q8TDR2 534 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 UBTD2Q8WUN7 234 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 KLHL6Q8WZ60 621 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 DIO2Q92813 273 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 KTI12Q96EK9 354 aaPredicted RBP5.23□□□□□ -1.57
PTPN4-203ENST00000430976 RCC1LQ96I51 464 aaKnown RBP5.23□□□□□ -1.57
PTPN4-203ENST00000430976 PBKQ96KB5 322 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 NECAB3Q96P71 396 aaPredicted RBP5.23□□□□□ -1.57
PTPN4-203ENST00000430976 RNF2Q99496 336 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 SOX7Q9BT81 388 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 NCKIPSDQ9NZQ3 722 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 SAE1Q9UBE0 346 aaPredicted RBP5.23□□□□□ -1.57
PTPN4-203ENST00000430976 TBC1D30Q9Y2I9 924 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 A0A1B0GV72 72 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 ZNF729A6NN14 1252 aaPredicted RBP5.23□□□□□ -1.57
PTPN4-203ENST00000430976 MID1O15344 667 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 LDOC1O95751 146 aaPredicted RBP5.23□□□□□ -1.57
PTPN4-203ENST00000430976 S100A8P05109 93 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 YES1P07947 543 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 SRPRAP08240 638 aaKnown RBP5.23□□□□□ -1.57
PTPN4-203ENST00000430976 CYP19A1P11511 503 aaPredicted RBP5.23□□□□□ -1.57
PTPN4-203ENST00000430976 CYP11B1P15538 503 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 CBLP22681 906 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 VIPR2P41587 438 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 SLC11A2P49281 568 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 SNRPD2P62316 118 aaKnown RBP5.23□□□□□ -1.57
PTPN4-203ENST00000430976 IRX4P78413 519 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 TLE4Q04727 773 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 BNIP3Q12983 259 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 EXT1Q16394 746 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 MEP1AQ16819 746 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 ARSJQ5FYB0 599 aaPredicted RBP5.23□□□□□ -1.57
PTPN4-203ENST00000430976 PLCXD3Q63HM9 321 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 ZNF544Q6NX49 715 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 LPCAT3Q6P1A2 487 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 BRAT1Q6PJG6 821 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 UQCC3Q6UW78 93 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 ZBTB49Q6ZSB9 765 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 SH2D5Q6ZV89 423 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 SSX7Q7RTT5 188 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 CDK20Q8IZL9 346 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 PPM1KQ8N3J5 372 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 LRRC18Q8N456 261 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 TC2NQ8N9U0 490 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 RASGRP4Q8TDF6 673 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 LARP4BQ92615 738 aaKnown RBP5.23□□□□□ -1.57
PTPN4-203ENST00000430976 NKD1Q969G9 470 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 TMEM80Q96HE8 168 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 OXNAD1Q96HP4 312 aaPredicted RBP5.23□□□□□ -1.57
PTPN4-203ENST00000430976 HARBI1Q96MB7 349 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 EBNA1BP2Q99848 306 aaKnown RBP5.23□□□□□ -1.57
PTPN4-203ENST00000430976 ZNF559Q9BR84 538 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 MRPS26Q9BYN8 205 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms