RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 TMBIM1Q969X1 311 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 REXO5Q96IC2 774 aaKnown RBP13.5□□□□□ -0.25
HOXC4-202ENST00000430889 SGPP1Q9BX95 441 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 UGT2B28Q9BY64 529 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 MAGIXQ9H6Y5 334 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 PAPOLBQ9NRJ5 636 aaKnown RBP13.5□□□□□ -0.25
HOXC4-202ENST00000430889 THG1LQ9NWX6 298 aaKnown RBP13.5□□□□□ -0.25
HOXC4-202ENST00000430889 DEC1Q9P2X7 70 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 FAM8A1Q9UBU6 413 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 RUVBL1Q9Y265 456 aaKnown RBP13.5□□□□□ -0.25
HOXC4-202ENST00000430889 GMEB1Q9Y692 573 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 COMMD3-BMI1R4GMX3 469 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 NUP214P35658 2090 aaPredicted RBP13.5□□□□□ -0.25
HOXC4-202ENST00000430889 CKAP5Q14008 2032 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 C17orf113A0A1B0GUU1 675 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 ENO4A6NNW6 628 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 H0YAE9 185 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 BMP10O95393 424 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 KIR3DL1P43629 444 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 CCR3P51677 355 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 ERVK-21P61565 698 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 SRSF11Q05519 484 aaKnown RBP13.5□□□□□ -0.25
HOXC4-202ENST00000430889 DAG1Q14118 895 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 MAP7Q14244 749 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 DUSP6Q16828 381 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 DUOXA1Q1HG43 343 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 FAM109BQ6ICB4 259 aaPredicted RBP13.5□□□□□ -0.25
HOXC4-202ENST00000430889 TMC5Q6UXY8 1006 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 GCNT7Q6ZNI0 430 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 RBM44Q6ZP01 1051 aaKnown RBP13.5□□□□□ -0.25
HOXC4-202ENST00000430889 ANKRD46Q86W74 232 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 CHPFQ8IZ52 775 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 PGBD3Q8N328 593 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 OR7A2PQ8NGA2 310 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 ZFP28Q8NHY6 868 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 ZNF480Q8WV37 535 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 CHTF18Q8WVB6 975 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 POP5Q969H6 163 aaKnown RBP13.5□□□□□ -0.25
HOXC4-202ENST00000430889 VPS50Q96JG6 964 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 HAUS8Q9BT25 410 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 TBCDQ9BTW9 1192 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 EBPLQ9BY08 206 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 ZCCHC2Q9C0B9 1178 aaKnown RBP13.5□□□□□ -0.25
HOXC4-202ENST00000430889 REXO4Q9GZR2 422 aaKnown RBP13.5□□□□□ -0.25
HOXC4-202ENST00000430889 CLK4Q9HAZ1 481 aaKnown RBP13.5□□□□□ -0.25
HOXC4-202ENST00000430889 SIRT5Q9NXA8 310 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 TUBA8Q9NY65 449 aaPredicted RBP13.5□□□□□ -0.25
HOXC4-202ENST00000430889 FADS3Q9Y5Q0 445 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 TRANK1O15050 2925 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 H3BM21 787 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 PLK4O00444 970 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 CLGNO14967 610 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 GSTA4O15217 222 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 YY2O15391 372 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 LRATO95237 230 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 SNAP29O95721 258 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 HPRP00739 348 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 ALPLP05186 524 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 EN2P19622 333 aaPredicted RBP13.49□□□□□ -0.25
HOXC4-202ENST00000430889 ACADLP28330 430 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 PBLDP30039 288 aaPredicted RBP13.49□□□□□ -0.25
HOXC4-202ENST00000430889 OPRD1P41143 372 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 ALDH3A2P51648 485 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 PNLIPRP1P54315 467 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 ARSFP54793 590 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 GPM6BQ13491 265 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 PGS1Q32NB8 556 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 NAIF1Q69YI7 327 aaPredicted RBP13.49□□□□□ -0.25
HOXC4-202ENST00000430889 ADNP2Q6IQ32 1131 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 TMEM214Q6NUQ4 689 aaKnown RBP13.49□□□□□ -0.25
HOXC4-202ENST00000430889 SLC30A9Q6PML9 568 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 ERN2Q76MJ5 926 aaKnown RBP13.49□□□□□ -0.25
HOXC4-202ENST00000430889 C11orf96Q7Z7L8 435 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 PATL1Q86TB9 770 aaKnown RBP13.49□□□□□ -0.25
HOXC4-202ENST00000430889 SERPINA11Q86U17 422 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 C7orf61Q8IZ16 206 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 DHRSXQ8N5I4 330 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 TERB1Q8NA31 727 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 OR7G3Q8NG95 312 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 FBXO30Q8TB52 745 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 FGF13Q92913 245 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 NEIL2Q969S2 332 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 FAM120BQ96EK7 910 aaKnown RBP13.49□□□□□ -0.25
HOXC4-202ENST00000430889 SLC47A1Q96FL8 570 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 MED8Q96G25 268 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 COX14Q96I36 57 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 FBXL20Q96IG2 436 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 FOPNLQ96NB1 174 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 SAMD11Q96NU1 681 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 MTERF1Q99551 399 aaKnown RBP13.49□□□□□ -0.25
HOXC4-202ENST00000430889 OR2AG1Q9H205 316 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 CAAP1Q9H8G2 361 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 TRIM39Q9HCM9 518 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 FAM120CQ9NX05 1096 aaKnown RBP13.49□□□□□ -0.25
HOXC4-202ENST00000430889 USE1Q9NZ43 259 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 ATXN10Q9UBB4 475 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 DNAJB9Q9UBS3 223 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 LIMD1Q9UGP4 676 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 UTS2RQ9UKP6 389 aa13.49□□□□□ -0.25
HOXC4-202ENST00000430889 GRXCR1A8MXD5 290 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms