RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 NDUFS3O75489 264 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 MST1P26927 711 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 SOX11P35716 441 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 TTPAP49638 278 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 TNFSF10P50591 281 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 TERF1P54274 439 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 PRTGQ2VWP7 1150 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.74■□□□□ 0.11
VARS-216ENST00000428445 PCID2Q5JVF3 399 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 RPUSD3Q6P087 351 aaKnown RBP15.74■□□□□ 0.11
VARS-216ENST00000428445 NDUFAF7Q7L592 441 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 TMEM139Q8IV31 216 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 SLC34A3Q8N130 599 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 OTUD6BQ8N6M0 293 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 PPFIBP2Q8ND30 876 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 MFSD3Q96ES6 412 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 BIRC8Q96P09 236 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 PANX3Q96QZ0 392 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 BAG1Q99933 345 aaPredicted RBP15.74■□□□□ 0.11
VARS-216ENST00000428445 ZFYVE21Q9BQ24 234 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 RAB11FIP5Q9BXF6 653 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 TREX1Q9NSU2 369 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 COPG2Q9UBF2 871 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 ENTPD4Q9Y227 616 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 RUVBL1Q9Y265 456 aaKnown RBP15.74■□□□□ 0.11
VARS-216ENST00000428445 KLK4Q9Y5K2 254 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 MRFAP1Q9Y605 127 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 CSMD2Q7Z408 3487 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 FBN2P35556 2912 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 SCN3AQ9NY46 2000 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 IGLV3-12A0A075B6K2 115 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 IGHV1-45A0A0A0MS14 117 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 DYTNA2CJ06 578 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 PCDH17O14917 1159 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 KPNA5O15131 536 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 WDPCPO95876 746 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 SNRPB2P08579 225 aaKnown RBP15.73■□□□□ 0.11
VARS-216ENST00000428445 ERVK-10P10266 1014 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 ITGAMP11215 1152 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 MGAT1P26572 445 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 ARNTP27540 789 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 MAT1AQ00266 395 aaKnown RBP15.73■□□□□ 0.11
VARS-216ENST00000428445 MUM1Q2TAK8 710 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 ACSBG2Q5FVE4 666 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 AARS2Q5JTZ9 985 aaKnown RBP15.73■□□□□ 0.11
VARS-216ENST00000428445 PRMT9Q6P2P2 845 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 LRRC8BQ6P9F7 803 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 GFRALQ6UXV0 394 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 SLC13A5Q86YT5 568 aaPredicted RBP15.73■□□□□ 0.11
VARS-216ENST00000428445 MCEMP1Q8IX19 187 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 AMER3Q8N944 861 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 HMGCLL1Q8TB92 370 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 COG1Q8WTW3 980 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 MMABQ96EY8 250 aaPredicted RBP15.73■□□□□ 0.11
VARS-216ENST00000428445 TRIM56Q9BRZ2 755 aaKnown RBP15.73■□□□□ 0.11
VARS-216ENST00000428445 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.73■□□□□ 0.11
VARS-216ENST00000428445 RBSNQ9H1K0 784 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 SH3BGRL2Q9UJC5 107 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 CRYL1Q9Y2S2 319 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 CPAMD8Q8IZJ3 1885 aa15.73■□□□□ 0.11
VARS-216ENST00000428445 A0A0A6YYC8 382 aaPredicted RBP15.72■□□□□ 0.11
VARS-216ENST00000428445 TRGV8A0A0C4DH27 118 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 IGHV3-20A0A0C4DH32 117 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 A0A1B0GUH1 482 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 OR2W5A6NFC9 320 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 ARHGEF33A8MVX0 844 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 I3L1I5 382 aaPredicted RBP15.72■□□□□ 0.11
VARS-216ENST00000428445 AP3B1O00203 1094 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 FOXS1O43638 330 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 VAPBO95292 243 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 HEXBP07686 556 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 CMPK1P30085 196 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 PMP22Q01453 160 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 C4orf22Q6V702 233 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 PLD3Q8IV08 490 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 RAB42Q8N4Z0 105 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 CSNK1A1LQ8N752 337 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 CCDC89Q8N998 374 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 OR9A1PQ8NGU1 263 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 ITLN2Q8WWU7 325 aaPredicted RBP15.72■□□□□ 0.11
VARS-216ENST00000428445 NR4A3Q92570 626 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 HAS2Q92819 552 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 RELTQ969Z4 430 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 VPS50Q96JG6 964 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 FOPNLQ96NB1 174 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 PLCD4Q9BRC7 762 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 MRPS30Q9NP92 439 aaKnown RBP15.72■□□□□ 0.11
VARS-216ENST00000428445 SYBUQ9NX95 663 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 MRPS2Q9Y399 296 aaKnown RBP15.72■□□□□ 0.11
VARS-216ENST00000428445 PCNX1Q96RV3 2341 aa15.72■□□□□ 0.11
VARS-216ENST00000428445 PDZD2O15018 2839 aa15.71■□□□□ 0.11
VARS-216ENST00000428445 TCRBV7S3A2A0A539 114 aa15.71■□□□□ 0.11
VARS-216ENST00000428445 P2RX6O15547 441 aa15.71■□□□□ 0.11
VARS-216ENST00000428445 WFS1O76024 890 aa15.71■□□□□ 0.11
VARS-216ENST00000428445 USP1O94782 785 aa15.71■□□□□ 0.11
VARS-216ENST00000428445 UNC5CO95185 931 aa15.71■□□□□ 0.11
VARS-216ENST00000428445 MATN4O95460 622 aa15.71■□□□□ 0.11
VARS-216ENST00000428445 SERPINA7P05543 415 aa15.71■□□□□ 0.11
VARS-216ENST00000428445 UQCRHP07919 91 aa15.71■□□□□ 0.11
VARS-216ENST00000428445 RPS3P23396 243 aaKnown RBP eCLIP15.71■□□□□ 0.117e-10■■■■□ 25.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms