RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 MTAPQ13126 283 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 VEPH1Q14D04 833 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 SMN1Q16637 294 aaKnown RBP18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 PTCHD3Q3KNS1 767 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 KIAA1614Q5VZ46 1190 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 FRG2Q64ET8 278 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 CYP2U1Q7Z449 544 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 TSPYL5Q86VY4 417 aaPredicted RBP18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 ZSWIM9Q86XI8 627 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 SYT12Q8IV01 421 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 DYNC2LI1Q8TCX1 351 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 HSH2DQ96JZ2 352 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 FRG2BQ96QU4 278 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 HHIPQ96QV1 700 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 RHNO1Q9BSD3 238 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 SLC12A9Q9BXP2 914 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 REEP1Q9H902 201 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 ACOT13Q9NPJ3 140 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 YIPF1Q9Y548 306 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 BACE2Q9Y5Z0 518 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 TMEM221A6NGB7 291 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 EIF3FO00303 357 aaPredicted RBP18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 KCNK5O95279 499 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 PARNO95453 639 aaKnown RBP18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 SEMG1P04279 462 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 OR56A5P0C7T3 313 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 CSNK1DP48730 415 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 HNMTP50135 292 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 ABRQ12979 859 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 ZXDCQ2QGD7 858 aaPredicted RBP18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 TMEM236Q5W0B7 351 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 ZNF621Q6ZSS3 439 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 TRMT2BQ96GJ1 504 aaKnown RBP18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 MYOCQ99972 504 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 INIPQ9NRY2 104 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 MAGEB17A8MXT2 336 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 NPIPB8E9PQR5 432 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 MRPS14O60783 128 aaKnown RBP18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 C1QCP02747 245 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 ALOX5P09917 674 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 BMP4P12644 408 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 HOXA9P31269 272 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 HALP42357 657 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 SLC6A12P48065 614 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 PTPN5P54829 565 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 NCS1P62166 190 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 SRSF11Q05519 484 aaKnown RBP18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 NEK5Q6P3R8 708 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 EIF3MQ7L2H7 374 aaKnown RBP18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 MFSD4AQ8N468 514 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 OR6Q1Q8NGQ2 317 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 PHF10Q8WUB8 498 aaKnown RBP18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 STARD7Q9NQZ5 370 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 RASSF1Q9NS23 344 aa18.44■□□□□ 0.54
TNFRSF8-202ENST00000413146 GPX2P18283 190 aa18.43■□□□□ 0.54
TNFRSF8-202ENST00000413146 AOAHP28039 575 aa18.43■□□□□ 0.54
TNFRSF8-202ENST00000413146 KRT20P35900 424 aa18.43■□□□□ 0.54
TNFRSF8-202ENST00000413146 RPS3AP61247 264 aaKnown RBP18.43■□□□□ 0.54
TNFRSF8-202ENST00000413146 B4GALNT1Q00973 533 aa18.43■□□□□ 0.54
TNFRSF8-202ENST00000413146 ATP13A5Q4VNC0 1218 aa18.43■□□□□ 0.54
TNFRSF8-202ENST00000413146 LRRC66Q68CR7 880 aa18.43■□□□□ 0.54
TNFRSF8-202ENST00000413146 CRTC1Q6UUV9 634 aa18.43■□□□□ 0.54
TNFRSF8-202ENST00000413146 CBLL1Q75N03 491 aa18.43■□□□□ 0.54
TNFRSF8-202ENST00000413146 PRSS48Q7RTY5 328 aa18.43■□□□□ 0.54
TNFRSF8-202ENST00000413146 ZNF461Q8TAF7 563 aa18.43■□□□□ 0.54
TNFRSF8-202ENST00000413146 SLC22A12Q96S37 553 aa18.43■□□□□ 0.54
TNFRSF8-202ENST00000413146 DNAJC11Q9NVH1 559 aa18.43■□□□□ 0.54
TNFRSF8-202ENST00000413146 SLC22A14Q9Y267 594 aa18.43■□□□□ 0.54
TNFRSF8-202ENST00000413146 NUP214P35658 2090 aaPredicted RBP18.43■□□□□ 0.54
TNFRSF8-202ENST00000413146 COX7A2P14406 83 aa18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 ITPKAP23677 461 aa18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 PPP3CCP48454 512 aa18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 ALDH7A1P49419 539 aaKnown RBP18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 ITGA1P56199 1179 aa18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 HIST2H2ACQ16777 129 aaPredicted RBP18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 PROX2Q3B8N5 592 aa18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 SNX29P2Q8IUI4 249 aa18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 IPCEF1Q8WWN9 437 aaPredicted RBP18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 THUMPD1Q9NXG2 353 aaKnown RBP18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 GIN1Q9NXP7 522 aa18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 PMF1-BGLAPU3KQ54 211 aa18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 A0A1W2PQ45 241 aaPredicted RBP18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 A0A1W2PQY0 241 aa18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 CPSF4O95639 269 aaKnown RBP18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 EPHA2P29317 976 aa18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 IFITM3Q01628 133 aa18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 UGT8Q16880 541 aa18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 TPRG1Q6ZUI0 275 aa18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 PTOV1Q86YD1 416 aa18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 PLD3Q8IV08 490 aa18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 CDC26Q8NHZ8 85 aa18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 LYSMD1Q96S90 227 aa18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 DPH2Q9BQC3 489 aaPredicted RBP18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 CLSTN3Q9BQT9 956 aa18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 EPS8L2Q9H6S3 715 aa18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 GPBP1L1Q9HC44 474 aaPredicted RBP18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 FAM120CQ9NX05 1096 aaKnown RBP18.42■□□□□ 0.54
TNFRSF8-202ENST00000413146 ZBBXA8MT70 800 aa18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 PRMT3O60678 531 aa18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 CYP2A7P20853 494 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms