RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 SF1Q15637 639 aaKnown RBP15.92■□□□□ 0.14
TSPAN4-208ENST00000409531 AMZ1Q400G9 498 aa15.92■□□□□ 0.14
TSPAN4-208ENST00000409531 WDR74Q6RFH5 385 aaPredicted RBP15.92■□□□□ 0.14
TSPAN4-208ENST00000409531 SPESP1Q6UW49 350 aa15.92■□□□□ 0.14
TSPAN4-208ENST00000409531 USP53Q70EK8 1073 aa15.92■□□□□ 0.14
TSPAN4-208ENST00000409531 C17orf64Q86WR6 236 aa15.92■□□□□ 0.14
TSPAN4-208ENST00000409531 PROSER1Q86XN7 944 aa15.92■□□□□ 0.14
TSPAN4-208ENST00000409531 LSMEM2Q8N112 164 aa15.92■□□□□ 0.14
TSPAN4-208ENST00000409531 CCNYL1Q8N7R7 359 aa15.92■□□□□ 0.14
TSPAN4-208ENST00000409531 RAB3IL1Q8TBN0 382 aa15.92■□□□□ 0.14
TSPAN4-208ENST00000409531 NCSTNQ92542 709 aa15.92■□□□□ 0.14
TSPAN4-208ENST00000409531 ESAMQ96AP7 390 aa15.92■□□□□ 0.14
TSPAN4-208ENST00000409531 CD180Q99467 661 aa15.92■□□□□ 0.14
TSPAN4-208ENST00000409531 NRTNQ99748 197 aa15.92■□□□□ 0.14
TSPAN4-208ENST00000409531 POLR1BQ9H9Y6 1135 aa15.92■□□□□ 0.14
TSPAN4-208ENST00000409531 ABCF3Q9NUQ8 709 aa15.92■□□□□ 0.14
TSPAN4-208ENST00000409531 SPHK1Q9NYA1 384 aa15.92■□□□□ 0.14
TSPAN4-208ENST00000409531 OGFRQ9NZT2 677 aa15.92■□□□□ 0.14
TSPAN4-208ENST00000409531 TAC3Q9UHF0 121 aa15.92■□□□□ 0.14
TSPAN4-208ENST00000409531 PCTPQ9UKL6 214 aa15.92■□□□□ 0.14
TSPAN4-208ENST00000409531 POMT2Q9UKY4 750 aa15.92■□□□□ 0.14
TSPAN4-208ENST00000409531 FAM208BQ5VWN6 2430 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 WDR91A4D1P6 747 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 TAF4O00268 1085 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 CLGNO14967 610 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 MLYCDO95822 493 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 UGT2B7P16662 529 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 NPPBP16860 134 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 GNAZP19086 355 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 HRH2P25021 359 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 GRK2P25098 689 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 CMPK1P30085 196 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 CCKBRP32239 447 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 ATP1A2P50993 1020 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 PDX1P52945 283 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 INHBCP55103 352 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 PRDX1Q06830 199 aaKnown RBP15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 ZFP36L1Q07352 338 aaKnown RBP15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 GTF2H2Q13888 395 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 SLC5A12Q1EHB4 618 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 ICE2Q659A1 982 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 IRGCQ6NXR0 463 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 GTF2H2CQ6P1K8 395 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 B3GNT8Q7Z7M8 397 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 CARFQ8N187 725 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 TEX9Q8N6V9 391 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 SNX31Q8N9S9 440 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 LMNTD1Q8N9Z9 388 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 OR2A1Q8NGT9 310 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 ZNF483Q8TF39 744 aaPredicted RBP15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 CNDP1Q96KN2 507 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 OR2A14Q96R47 310 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 TRMOQ9BU70 441 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 ACAT2Q9BWD1 397 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 STRADBQ9C0K7 418 aa15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 MRPS30Q9NP92 439 aaKnown RBP15.91■□□□□ 0.14
TSPAN4-208ENST00000409531 ACACAQ13085 2346 aa15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 MN1Q10571 1320 aaPredicted RBP15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 TLCD2A6NGC4 264 aa15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 LRRC14BA6NHZ5 514 aa15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 CAPN5O15484 640 aaPredicted RBP15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 NPHS1O60500 1241 aa15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 SNUPNO95149 360 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 SERPINE1P05121 402 aa15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 FGF3P11487 239 aaPredicted RBP15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 PSMB5P28074 263 aa15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 PRDX3P30048 256 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 PEBP1P30086 187 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 CLCQ05315 142 aa15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 CHI3L2Q15782 390 aa15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 UNC50Q53HI1 259 aa15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 NKAIN2Q5VXU1 208 aa15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 ATG16L1Q676U5 607 aa15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 FRMD7Q6ZUT3 714 aa15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 GOLGA7Q7Z5G4 137 aa15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 OR2L3Q8NG85 312 aa15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 WDR36Q8NI36 951 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 ATP6V1E2Q96A05 226 aa15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 LIN37Q96GY3 246 aaPredicted RBP15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 OR4K3Q96R72 315 aa15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 GATA5Q9BWX5 397 aaPredicted RBP15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 IPPKQ9H8X2 491 aa15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 C1GALT1Q9NS00 363 aa15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 ASB1Q9Y576 335 aa15.9■□□□□ 0.14
TSPAN4-208ENST00000409531 FREM2Q5SZK8 3169 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 APC2O95996 2303 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 CCDC187A0A096LP49 1063 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 A0A0J9YY10 115 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 TMEM114B3SHH9 223 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 OTCP00480 354 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 C9P02748 559 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 CDH3P22223 829 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 CCNG1P51959 295 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 GABREP78334 506 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 PCDH1Q08174 1060 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 LCP2Q13094 533 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 EIF3IQ13347 325 aaKnown RBP15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 RBBP7Q16576 425 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 C3orf38Q5JPI3 329 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 TMEM71Q6P5X7 295 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms