RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 RACK1P63244 317 aaKnown RBP13.35□□□□□ -0.27
COL6A2-203ENST00000397763 CACNG1Q06432 222 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 MAD2L1BPQ15013 274 aaPredicted RBP13.35□□□□□ -0.27
COL6A2-203ENST00000397763 FAM214AQ32MH5 1076 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 ANKS3Q6ZW76 656 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 CYP2U1Q7Z449 544 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 MMAAQ8IVH4 418 aaKnown RBP13.35□□□□□ -0.27
COL6A2-203ENST00000397763 MINDY2Q8NBR6 621 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 FATE1Q969F0 183 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 EFHD2Q96C19 240 aaPredicted RBP13.35□□□□□ -0.27
COL6A2-203ENST00000397763 OR51E2Q9H255 320 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 C14orf119Q9NWQ9 140 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 GPR83Q9NYM4 423 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 CD84Q9UIB8 345 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 VPS9D1Q9Y2B5 631 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 DYTNA2CJ06 578 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 CLIC1O00299 241 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 COCHO43405 550 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 ZNF7P17097 686 aaPredicted RBP13.35□□□□□ -0.27
COL6A2-203ENST00000397763 EPORP19235 508 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 RYKP34925 604 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 EIF2DP41214 584 aaKnown RBP13.35□□□□□ -0.27
COL6A2-203ENST00000397763 NRIP1P48552 1158 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 RGS4P49798 205 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 ZNF648Q5T619 568 aaPredicted RBP13.35□□□□□ -0.27
COL6A2-203ENST00000397763 FAM180BQ6P0A1 224 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 SHQ1Q6PI26 577 aaKnown RBP13.35□□□□□ -0.27
COL6A2-203ENST00000397763 ZBTB2Q8N680 514 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 RHOXF1Q8NHV9 184 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 UTP15Q8TED0 518 aaKnown RBP13.35□□□□□ -0.27
COL6A2-203ENST00000397763 ZFYVE19Q96K21 471 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 RDH12Q96NR8 316 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 SH3GL1Q99961 368 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 TTPALQ9BTX7 342 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 RAD18Q9NS91 495 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 RLIMQ9NVW2 624 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 THG1LQ9NWX6 298 aaKnown RBP13.35□□□□□ -0.27
COL6A2-203ENST00000397763 THUMPD1Q9NXG2 353 aaKnown RBP13.35□□□□□ -0.27
COL6A2-203ENST00000397763 SLC22A14Q9Y267 594 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 MICAL3Q7RTP6 2002 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 TRBV5-3A0A0A0MS03 114 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 UPK1BO75841 260 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 PTPN6P29350 595 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 SLC19A1P41440 591 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 RPIAP49247 311 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 MRPL19P49406 292 aaKnown RBP13.35□□□□□ -0.27
COL6A2-203ENST00000397763 BOP1Q14137 746 aaKnown RBP13.35□□□□□ -0.27
COL6A2-203ENST00000397763 UAP1L1Q3KQV9 507 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 CCBE1Q6UXH8 406 aaPredicted RBP13.35□□□□□ -0.27
COL6A2-203ENST00000397763 AADATQ8N5Z0 425 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 LINC01599Q8WXQ3 324 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 BTBD3Q9Y2F9 522 aa13.35□□□□□ -0.27
COL6A2-203ENST00000397763 NOTOA8MTQ0 251 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 SLC28A1O00337 649 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 GAPDHSO14556 408 aaPredicted RBP13.34□□□□□ -0.27
COL6A2-203ENST00000397763 FPGTO14772 594 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 PRAMEF4O60810 478 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 WDR47O94967 919 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 GBAP04062 536 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 FABP3P05413 133 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 RETP07949 1114 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 TGFBR2P37173 567 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 CDH4P55283 916 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 CCL23P55773 120 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 PRAMEF9Q5VWM5 478 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 SNX20Q7Z614 316 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 P3H2Q8IVL5 708 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 FUBP3Q96I24 572 aaKnown RBP eCLIP13.34□□□□□ -0.27
COL6A2-203ENST00000397763 COPS4Q9BT78 406 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 DNMT3LQ9UJW3 386 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 NAALAD2Q9Y3Q0 740 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 UGT2A1Q9Y4X1 527 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 GBF1Q92538 1859 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 SLC38A8A6NNN8 435 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 TBL1XO60907 577 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 DUSP11O75319 330 aaKnown RBP13.34□□□□□ -0.27
COL6A2-203ENST00000397763 CLDN9O95484 217 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 CASP3P42574 277 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 CLCN4P51793 760 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 TSTA3Q13630 321 aaPredicted RBP13.34□□□□□ -0.27
COL6A2-203ENST00000397763 VRK3Q8IV63 474 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 ENTHD1Q8IYW4 607 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 SPPL2AQ8TCT8 520 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 APH1BQ8WW43 257 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 DHRS1Q96LJ7 313 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 KCNS3Q9BQ31 491 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 TMEM121BQ9BXQ6 578 aaPredicted RBP13.34□□□□□ -0.27
COL6A2-203ENST00000397763 RERGLQ9H628 205 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 ZFYVE1Q9HBF4 777 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 OLA1Q9NTK5 396 aaKnown RBP13.34□□□□□ -0.27
COL6A2-203ENST00000397763 RAPGEFL1Q9UHV5 662 aa13.34□□□□□ -0.27
COL6A2-203ENST00000397763 PDZK1P1A8MUH7 402 aa13.33□□□□□ -0.27
COL6A2-203ENST00000397763 EVPLLA8MZ36 301 aa13.33□□□□□ -0.27
COL6A2-203ENST00000397763 STSP08842 583 aa13.33□□□□□ -0.27
COL6A2-203ENST00000397763 HOXD11P31277 338 aaPredicted RBP13.33□□□□□ -0.27
COL6A2-203ENST00000397763 NFATC2Q13469 925 aa13.33□□□□□ -0.27
COL6A2-203ENST00000397763 MBTPS1Q14703 1052 aa13.33□□□□□ -0.27
COL6A2-203ENST00000397763 SYT6Q5T7P8 510 aaPredicted RBP13.33□□□□□ -0.27
COL6A2-203ENST00000397763 LRRC66Q68CR7 880 aa13.33□□□□□ -0.27
COL6A2-203ENST00000397763 KDM4DQ6B0I6 523 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms