RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 TRAP1Q12931 704 aaKnown RBP2.82□□□□□ -1.96
PTPRC-205ENST00000391970 SQLEQ14534 574 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 ZNF674Q2M3X9 581 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 PDLIM3Q53GG5 364 aaPredicted RBP2.82□□□□□ -1.96
PTPRC-205ENST00000391970 SLC25A53Q5H9E4 307 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 SLC10A5Q5PT55 438 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 C20orf194Q5TEA3 1177 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 LYSMD4Q5XG99 296 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 RUSC1-AS1Q66K80 236 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 FAM166AQ6J272 317 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 CASC4Q6P4E1 433 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 NHLRC1Q6VVB1 395 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 MARK2Q7KZI7 788 aaKnown RBP2.82□□□□□ -1.96
PTPRC-205ENST00000391970 TRMT1LQ7Z2T5 733 aaKnown RBP2.82□□□□□ -1.96
PTPRC-205ENST00000391970 PHLDB2Q86SQ0 1253 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 PIGZQ86VD9 579 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 SNX32Q86XE0 403 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 SYCP3Q8IZU3 236 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 TMCO5AQ8N6Q1 288 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 KLHDC1Q8N7A1 406 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 DBF4BQ8NFT6 615 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 OR7G3Q8NG95 312 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 AFAP1L1Q8TED9 768 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 PTP4A1Q93096 173 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 TEKT1Q969V4 418 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 TSACCQ96A04 125 aaPredicted RBP2.82□□□□□ -1.96
PTPRC-205ENST00000391970 ZNF524Q96C55 264 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 NODALQ96S42 347 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 UTP14AQ9BVJ6 771 aaKnown RBP2.82□□□□□ -1.96
PTPRC-205ENST00000391970 MTMR12Q9C0I1 747 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 RSPH9Q9H1X1 276 aaPredicted RBP2.82□□□□□ -1.96
PTPRC-205ENST00000391970 TMEM206Q9H813 350 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 CHST11Q9NPF2 352 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 ABCB8Q9NUT2 735 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 PKD2L2Q9NZM6 624 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 SEPT10Q9P0V9 454 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 PROCRQ9UNN8 238 aa2.82□□□□□ -1.96
PTPRC-205ENST00000391970 KRTAP29-1A8MX34 341 aaPredicted RBP2.81□□□□□ -1.96
PTPRC-205ENST00000391970 C17orf105B2RV13 164 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 CCL24O00175 119 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 SLC33A1O00400 549 aaPredicted RBP2.81□□□□□ -1.96
PTPRC-205ENST00000391970 NADKO95544 446 aaPredicted RBP2.81□□□□□ -1.96
PTPRC-205ENST00000391970 CAVIN2O95810 425 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 CLPTM1O96005 669 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 NGFP01138 241 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 EDN1P05305 212 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 PRSS1P07477 247 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 ERVK-10P10266 1014 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 VDRP11473 427 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 ASIC1P78348 528 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 FOLH1Q04609 750 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 SULT2A1Q06520 285 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 RBBP7Q16576 425 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 KIAA1644Q3SXP7 199 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 GPR33Q49SQ1 333 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 XKR6Q5GH73 641 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 IYDQ6PHW0 289 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 PRSS55Q6UWB4 352 aaPredicted RBP2.81□□□□□ -1.96
PTPRC-205ENST00000391970 CEACAM20Q6UY09 585 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 SLC16A9Q7RTY1 509 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 CCDC91Q7Z6B0 441 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 NR2C2APQ86WQ0 139 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 CREBRFQ8IUR6 639 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 DCUN1D3Q8IWE4 304 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 TUSC5Q8IXB3 177 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 KBTBD8Q8NFY9 601 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 OR10V1Q8NGI7 309 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 OR13C3Q8NGS6 347 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 NCOA7Q8NI08 942 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 LRRC8CQ8TDW0 803 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 SLC26A7Q8TE54 656 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 HPSE2Q8WWQ2 592 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 PGM2Q96G03 612 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 C4orf45Q96LM5 186 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 AK8Q96MA6 479 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 GDAP1L1Q96MZ0 367 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 INPP4AQ96PE3 977 aaPredicted RBP2.81□□□□□ -1.96
PTPRC-205ENST00000391970 NDNQ99608 321 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 EPYCQ99645 322 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 CDK19Q9BWU1 502 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 KRTAP9-8Q9BYQ0 159 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 SDCBP2Q9H190 292 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 PHPT1Q9NRX4 125 aaPredicted RBP2.81□□□□□ -1.96
PTPRC-205ENST00000391970 INTS9Q9NV88 658 aaKnown RBP2.81□□□□□ -1.96
PTPRC-205ENST00000391970 DNAJC17Q9NVM6 304 aaKnown RBP2.81□□□□□ -1.96
PTPRC-205ENST00000391970 SLCO1C1Q9NYB5 712 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 VPS18Q9P253 973 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 GRID1Q9ULK0 1009 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 ICAM5Q9UMF0 924 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 TNNQ9UQP3 1299 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 CHKBQ9Y259 395 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 LRP12Q9Y561 859 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 ZCCHC6Q5VYS8 1495 aaKnown RBP2.81□□□□□ -1.96
PTPRC-205ENST00000391970 KIAA1210Q9ULL0 1709 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 UNC13AQ9UPW8 1703 aa2.81□□□□□ -1.96
PTPRC-205ENST00000391970 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.8□□□□□ -1.96
PTPRC-205ENST00000391970 A0A0G2JLW4 131 aa2.8□□□□□ -1.96
PTPRC-205ENST00000391970 TRBV5-5A0A0J9YX44 114 aa2.8□□□□□ -1.96
PTPRC-205ENST00000391970 PMS2P5A8MQ11 134 aa2.8□□□□□ -1.96
PTPRC-205ENST00000391970 KBTBD13C9JR72 458 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms