RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 CCNOP22674 350 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 HNRNPH3P31942 346 aaKnown RBP15.66■□□□□ 0.1
COL18A1-203ENST00000359759 MAGEA11P43364 429 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 DSTNP60981 165 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 ZNF227Q86WZ6 799 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 DGKQP52824 942 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 INTS6LQ5JSJ4 861 aaKnown RBP15.66■□□□□ 0.1
COL18A1-203ENST00000359759 OR4F3Q6IEY1 312 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 AQP11Q8NBQ7 271 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 PCED1BQ96HM7 432 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 LRRC3Q9BY71 257 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 NANSQ9NR45 359 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 MMP3P08254 477 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 RHDQ02161 417 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 OXR1Q8N573 874 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 OR13C4Q8NGS5 318 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 PKP2Q99959 881 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 SLC5A7Q9GZV3 580 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 MTMR10Q9NXD2 777 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 PCDH10Q9P2E7 1040 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 CSF2P04141 144 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 PTPRUQ92729 1446 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 CFAP20Q9Y6A4 193 aaKnown RBP15.66■□□□□ 0.1
COL18A1-203ENST00000359759 LCN1P31025 176 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 PCBP1Q15365 356 aaKnown RBP eCLIP15.66■□□□□ 0.12e-7■■■□□ 15
COL18A1-203ENST00000359759 MEP1AQ16819 746 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 AKTIPQ9H8T0 292 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 ITM2CQ9NQX7 267 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 E9PCH4 1651 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 MPIP34949 423 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 MAP2K5Q13163 448 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 VMACQ2NL98 169 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 FBXL20Q96IG2 436 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 RHCGQ9UBD6 479 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 ST14Q9Y5Y6 855 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 GRXCR1A8MXD5 290 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 SIX3O95343 332 aaPredicted RBP15.65■□□□□ 0.1
COL18A1-203ENST00000359759 XRCC1P18887 633 aaPredicted RBP15.65■□□□□ 0.1
COL18A1-203ENST00000359759 RPS3P23396 243 aaKnown RBP eCLIP15.65■□□□□ 0.12e-8■■■□□ 17.7
COL18A1-203ENST00000359759 SLC15A1P46059 708 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 RNF144AP50876 292 aaPredicted RBP15.65■□□□□ 0.1
COL18A1-203ENST00000359759 TAS2R39P59534 338 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 TLCD1Q96CP7 247 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 PRKACGP22612 351 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 NR0B1P51843 470 aaKnown RBP15.65■□□□□ 0.1
COL18A1-203ENST00000359759 GPC2Q8N158 579 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 UPF1Q92900 1129 aaKnown RBP eCLIP15.65■□□□□ 0.11e-9■■■■□ 24.8
COL18A1-203ENST00000359759 CCSER2Q9H7U1 834 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 HERVK_113P63132 956 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 TLE2Q04725 743 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 ZBED5Q49AG3 693 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 KLHL6Q8WZ60 621 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 HSD17B14Q9BPX1 270 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 ERVK-6Q9BXR3 956 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 C14orf105Q9NVL8 296 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 CFL2Q9Y281 166 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 HSPB11Q9Y547 144 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 AGPSO00116 658 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 FXYD6P3P58550 94 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 ENPP2Q13822 863 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 SLBPQ14493 270 aaKnown RBP eCLIP15.65■□□□□ 0.1
COL18A1-203ENST00000359759 PDZD7Q9H5P4 517 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 P2RX2Q9UBL9 471 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 SH2B3Q9UQQ2 575 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 PCDHGA11Q9Y5H2 935 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 NDUFS4O43181 175 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 LMO2P25791 158 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 OR8K3Q8NH51 312 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 HEPHQ9BQS7 1158 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 TBL1XR1Q9BZK7 514 aa15.65■□□□□ 0.1
COL18A1-203ENST00000359759 SLIT1O75093 1534 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 TCRBV7S3A2A0A539 114 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 PRORSD1PA6NEY8 169 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 CLIC1O00299 241 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 POP4O95707 220 aaKnown RBP15.64■□□□□ 0.09
COL18A1-203ENST00000359759 ILF3Q12906 894 aaKnown RBP eCLIP15.64■□□□□ 0.099e-6■■■□□ 17.6
COL18A1-203ENST00000359759 PIGWQ7Z7B1 504 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 DGAT2Q96PD7 388 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 EDARQ9UNE0 448 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 K7EPI3 171 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 PBX1P40424 430 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 JAM2P57087 298 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 LRRC32Q14392 662 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 SPPL2BQ8TCT7 592 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 NCSTNQ92542 709 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 ENY2Q9NPA8 101 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 ABCB8Q9NUT2 735 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 TAS2R1Q9NYW7 299 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 ZNF670-ZNF695F2Z2N8 137 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 NIPSNAP2O75323 286 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 FGF19O95750 216 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 P4HA3Q7Z4N8 544 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 PPTC7Q8NI37 304 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 MSANTD3Q96H12 275 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 MEGF6O75095 1541 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 B4GALT4O60513 344 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 TFPTP0C1Z6 253 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 PTGER3P43115 390 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 MMP14P50281 582 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 AIMP2Q13155 320 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms