RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 PRKCZQ05513 592 aa20.14■□□□□ 0.82
TRIM3-202ENST00000359518 PLEKHG7Q6ZR37 379 aa20.14■□□□□ 0.82
TRIM3-202ENST00000359518 CHST9Q7L1S5 443 aa20.14■□□□□ 0.82
TRIM3-202ENST00000359518 IFNL1Q8IU54 200 aa20.14■□□□□ 0.82
TRIM3-202ENST00000359518 SLIRPQ9GZT3 109 aaKnown RBP20.14■□□□□ 0.82
TRIM3-202ENST00000359518 RUBCNLQ9H714 662 aa20.14■□□□□ 0.82
TRIM3-202ENST00000359518 ITM2CQ9NQX7 267 aa20.14■□□□□ 0.82
TRIM3-202ENST00000359518 THUMPD1Q9NXG2 353 aaKnown RBP20.14■□□□□ 0.82
TRIM3-202ENST00000359518 PCDHB7Q9Y5E2 793 aa20.14■□□□□ 0.82
TRIM3-202ENST00000359518 TET1Q8NFU7 2136 aa20.14■□□□□ 0.81
TRIM3-202ENST00000359518 COQ9O75208 318 aa20.14■□□□□ 0.81
TRIM3-202ENST00000359518 WBP4O75554 376 aaKnown RBP20.14■□□□□ 0.81
TRIM3-202ENST00000359518 DBTP11182 482 aaKnown RBP20.14■□□□□ 0.81
TRIM3-202ENST00000359518 RPS3P23396 243 aaKnown RBP eCLIP20.14■□□□□ 0.81
TRIM3-202ENST00000359518 LIPAP38571 399 aa20.14■□□□□ 0.81
TRIM3-202ENST00000359518 VMACQ2NL98 169 aa20.14■□□□□ 0.81
TRIM3-202ENST00000359518 SYT12Q8IV01 421 aa20.14■□□□□ 0.81
TRIM3-202ENST00000359518 VRK3Q8IV63 474 aa20.14■□□□□ 0.81
TRIM3-202ENST00000359518 DNASE1L2Q92874 299 aa20.14■□□□□ 0.81
TRIM3-202ENST00000359518 DSN1Q9H410 356 aa20.14■□□□□ 0.81
TRIM3-202ENST00000359518 REEP1Q9H902 201 aa20.14■□□□□ 0.81
TRIM3-202ENST00000359518 MAN2B2Q9Y2E5 1009 aa20.14■□□□□ 0.81
TRIM3-202ENST00000359518 TBX1O43435 398 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 DNAJB5O75953 348 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 MYO1DO94832 1006 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 JUNDP17535 347 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 TPTEP56180 551 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 FAM26DQ5JW98 314 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 MICAL3Q7RTP6 2002 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 NXPE1Q8N323 547 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 DBF4BQ8NFT6 615 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 DCSTAMPQ9H295 470 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 RNF167Q9H6Y7 350 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 YY2O15391 372 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 FPR1P21462 350 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 CYP4F2P78329 520 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 KIAA1614Q5VZ46 1190 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 NOXRED1Q6NXP6 359 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 PSD4Q8NDX1 1056 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 OR52J3Q8NH60 311 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 TTLL2Q9BWV7 592 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 CD84Q9UIB8 345 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 NDRG4Q9ULP0 352 aaKnown RBP20.13■□□□□ 0.81
TRIM3-202ENST00000359518 LOC100506127A0A0U1RQW1 187 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 NPIPB15A6NHN6 443 aaPredicted RBP20.13■□□□□ 0.81
TRIM3-202ENST00000359518 M0R129 80 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 COX7A2P14406 83 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 HMGA1P17096 107 aaKnown RBP20.13■□□□□ 0.81
TRIM3-202ENST00000359518 TTLL9Q3SXZ7 439 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 TRAF7Q6Q0C0 670 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 ZZZ3Q8IYH5 903 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 ELMO1Q92556 727 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 PLD4Q96BZ4 506 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 ASIC4Q96FT7 647 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 TMEM161AQ9NX61 479 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 SCHIP1Q9P0W5 487 aaPredicted RBP20.13■□□□□ 0.81
TRIM3-202ENST00000359518 SNX6Q9UNH7 406 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 WDR37Q9Y2I8 494 aa20.13■□□□□ 0.81
TRIM3-202ENST00000359518 HTR3EA5X5Y0 456 aa20.12■□□□□ 0.81
TRIM3-202ENST00000359518 NPRL3Q12980 569 aa20.12■□□□□ 0.81
TRIM3-202ENST00000359518 ATP13A5Q4VNC0 1218 aa20.12■□□□□ 0.81
TRIM3-202ENST00000359518 CCSAPQ6IQ19 270 aaPredicted RBP20.12■□□□□ 0.81
TRIM3-202ENST00000359518 ANGPTL8Q6UXH0 198 aa20.12■□□□□ 0.81
TRIM3-202ENST00000359518 CYP2U1Q7Z449 544 aa20.12■□□□□ 0.81
TRIM3-202ENST00000359518 NELL1Q92832 810 aa20.12■□□□□ 0.81
TRIM3-202ENST00000359518 CDK5RAP1Q96SZ6 601 aaKnown RBP20.12■□□□□ 0.81
TRIM3-202ENST00000359518 FBXO8Q9NRD0 319 aa20.12■□□□□ 0.81
TRIM3-202ENST00000359518 CLEC4EQ9ULY5 219 aa20.12■□□□□ 0.81
TRIM3-202ENST00000359518 BTBD3Q9Y2F9 522 aa20.12■□□□□ 0.81
TRIM3-202ENST00000359518 TSC22D4Q9Y3Q8 395 aa20.12■□□□□ 0.81
TRIM3-202ENST00000359518 EPN2O95208 641 aa20.12■□□□□ 0.81
TRIM3-202ENST00000359518 OPN1SWP03999 348 aa20.12■□□□□ 0.81
TRIM3-202ENST00000359518 ABCB1P08183 1280 aaPredicted RBP20.12■□□□□ 0.81
TRIM3-202ENST00000359518 HOXD12P35452 270 aa20.12■□□□□ 0.81
TRIM3-202ENST00000359518 KEAP1Q14145 624 aa20.12■□□□□ 0.81
TRIM3-202ENST00000359518 CYP27C1Q4G0S4 372 aa20.12■□□□□ 0.81
TRIM3-202ENST00000359518 INO80DQ53TQ3 878 aaPredicted RBP20.12■□□□□ 0.81
TRIM3-202ENST00000359518 PTOV1Q86YD1 416 aa20.12■□□□□ 0.81
TRIM3-202ENST00000359518 P3H2Q8IVL5 708 aa20.12■□□□□ 0.81
TRIM3-202ENST00000359518 CASD1Q96PB1 797 aa20.12■□□□□ 0.81
TRIM3-202ENST00000359518 ASIC5Q9NY37 505 aa20.12■□□□□ 0.81
TRIM3-202ENST00000359518 KIAA1522Q9P206 1035 aaPredicted RBP20.12■□□□□ 0.81
TRIM3-202ENST00000359518 AP3M1Q9Y2T2 418 aa20.12■□□□□ 0.81
TRIM3-202ENST00000359518 GALTP07902 379 aa20.11■□□□□ 0.81
TRIM3-202ENST00000359518 PRPS2P11908 318 aa20.11■□□□□ 0.81
TRIM3-202ENST00000359518 HOXB9P17482 250 aaPredicted RBP20.11■□□□□ 0.81
TRIM3-202ENST00000359518 CD40LGP29965 261 aa20.11■□□□□ 0.81
TRIM3-202ENST00000359518 MTA1Q13330 715 aa20.11■□□□□ 0.81
TRIM3-202ENST00000359518 CAMK2GQ13555 558 aaPredicted RBP20.11■□□□□ 0.81
TRIM3-202ENST00000359518 UGT8Q16880 541 aa20.11■□□□□ 0.81
TRIM3-202ENST00000359518 ENTHD1Q8IYW4 607 aa20.11■□□□□ 0.81
TRIM3-202ENST00000359518 SH3KBP1Q96B97 665 aa20.11■□□□□ 0.81
TRIM3-202ENST00000359518 HTATIP2Q9BUP3 242 aa20.11■□□□□ 0.81
TRIM3-202ENST00000359518 SLC29A3Q9BZD2 475 aa20.11■□□□□ 0.81
TRIM3-202ENST00000359518 TMEM184CQ9NVA4 438 aa20.11■□□□□ 0.81
TRIM3-202ENST00000359518 TESMINQ9Y4I5 508 aa20.11■□□□□ 0.81
TRIM3-202ENST00000359518 TBKBP1A7MCY6 615 aa20.11■□□□□ 0.81
TRIM3-202ENST00000359518 MAGEB17A8MXT2 336 aa20.11■□□□□ 0.81
TRIM3-202ENST00000359518 LAMP1P11279 417 aa20.11■□□□□ 0.81
TRIM3-202ENST00000359518 TGFBR2P37173 567 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms