RNA–Protein interactions for RNA: ENST00000349780.8

CDK5RAP2-201, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 6,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-201ENST00000349780 PRKAG1P54619 331 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 BIKQ13323 160 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 BOP1Q14137 746 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 ZBTB6Q15916 424 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 GFOD2Q3B7J2 385 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 ZNF648Q5T619 568 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 C10orf62Q5T681 223 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 FAM117BQ6P1L5 589 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 ZNF730Q6ZMV8 503 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 RAB11FIP2Q7L804 512 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 FOXRED2Q8IWF2 684 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 TMEM185AQ8NFB2 350 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 PEX13Q92968 403 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 NFAT5O94916 1531 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 SCAMP1O15126 338 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 CNTN5O94779 1100 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 CDK1P06493 297 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 GRK5P34947 590 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 GPR85P60893 370 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 ILF3Q12906 894 aaKnown RBP eCLIP11.5□□□□□ -0.575e-6■■■■□ 22.6
CDK5RAP2-201ENST00000349780 TARDBPQ13148 414 aaKnown RBP eCLIP11.5□□□□□ -0.575e-8■■■■□ 21.2
CDK5RAP2-201ENST00000349780 TOR2AQ5JU69 321 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 MYOCQ99972 504 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 TGIF2Q9GZN2 237 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 REEP4Q9H6H4 257 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 GIMAP2Q9UG22 337 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 GMEB2Q9UKD1 530 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 SCAMP3O14828 347 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 RAB36O95755 333 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 IRF1P10914 325 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 SSTR4P31391 388 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 TTPAP49638 278 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 RGS19P49795 217 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 BATFQ16520 125 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 DHRS4L2Q6PKH6 230 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 MINDY1Q8N5J2 469 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 TMEM102Q8N9M5 508 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 BOLLQ8N9W6 283 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 METTL8Q9H825 291 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 IPPKQ9H8X2 491 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 DNAJC27Q9NZQ0 273 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 KLK14Q9P0G3 267 aa11.5□□□□□ -0.57
CDK5RAP2-201ENST00000349780 TFP02787 698 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 HMGN1P05114 100 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 FHP07954 510 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 PAMR1Q6UXH9 720 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 NIPA2Q8N8Q9 360 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 ACBD4Q8NC06 268 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 OR10H4Q8NGA5 316 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 OR5T3Q8NGG3 340 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 MOCOSQ96EN8 888 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 CST11Q9H112 138 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 POLR2J3Q9H1A7 115 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 OR51E2Q9H255 320 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 NIPAL2Q9H841 368 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 GULP1Q9UBP9 304 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 MAP4K5Q9Y4K4 846 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 PCDHA2Q9Y5H9 948 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 CORINQ9Y5Q5 1042 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 F5H5T6 163 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 HK1P19367 917 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 GTF2H2Q13888 395 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 LRRC37A5PQ49AS3 106 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 CES5AQ6NT32 575 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 GTF2H2CQ6P1K8 395 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 COPS8Q99627 209 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 CARS2Q9HA77 564 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 NUMBLQ9Y6R0 609 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 RIC1Q4ADV7 1423 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 CD163L1Q9NR16 1453 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 NWD1Q149M9 1564 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 PCDHGA12O60330 932 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 ENDOD1O94919 500 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 HNF1BP35680 557 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 AVPI1Q5T686 147 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 TCEAL6Q6IPX3 200 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 KCTD20Q7Z5Y7 419 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 COQ8BQ96D53 544 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 HSD17B14Q9BPX1 270 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 RIOK2Q9BVS4 552 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 OR51J1Q9H342 316 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 NARFLQ9H6Q4 476 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 CNTN3Q9P232 1028 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 NOP16Q9Y3C1 178 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 SLC35F4A4IF30 521 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 E7ESA3 106 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 E2F3O00716 465 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 ARPC5O15511 151 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 SEC14L2O76054 403 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 SNAPINO95295 136 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 ALDOAP04075 364 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 CLUP10909 449 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 RPL3P39023 403 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 DGKEP52429 567 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 CTBP2P56545 445 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 ADAM8P78325 824 aa11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 ZNF177Q13360 481 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 PPP1R26Q5T8A7 1209 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP2-201ENST00000349780 OAFQ86UD1 273 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms