RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 ADAM12O43184 909 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 BNIP3LO60238 219 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 GUCY1B2O75343 617 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 CPSF4O95639 269 aaKnown RBP11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 ACPPP15309 386 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 PTPN2P17706 415 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 S100A3P33764 101 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 RYKP34925 604 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 EIF2DP41214 584 aaKnown RBP11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 MAPKAPK2P49137 400 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 CLK1P49759 484 aaKnown RBP11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 ST13P50502 369 aaKnown RBP11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 RPS14P62263 151 aaKnown RBP11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 MAD2L1BPQ15013 274 aaPredicted RBP11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 OR2T5Q6IEZ7 315 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 ADAMTSL2Q86TH1 951 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 LYSMD2Q8IV50 215 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 OR2T29Q8NH02 315 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 WFDC5Q8TCV5 224 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 RDH12Q96NR8 316 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 CLPBQ9H078 707 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 IL17CQ9P0M4 197 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 A8MV72 311 aaPredicted RBP11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 ACSL4O60488 711 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 PRAMEF4O60810 478 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 FKTNO75072 461 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 CLDN7O95471 211 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 ESR1P03372 595 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 ATF6P18850 670 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 TYMPP19971 482 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 ITPKAP23677 461 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 SLC19A1P41440 591 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 PTGER3P43115 390 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 DDX39BQ13838 428 aaKnown RBP11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 DSC3Q14574 896 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 PRAMEF9Q5VWM5 478 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 ALG1LQ6GMV1 187 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 SHQ1Q6PI26 577 aaKnown RBP11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 TAS1R1Q7RTX1 841 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 CALHM3Q86XJ0 350 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 ENTHD1Q8IYW4 607 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 SELENOMQ8WWX9 145 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 EFHD2Q96C19 240 aaPredicted RBP11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 HSH2DQ96JZ2 352 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 C8orf48Q96LL4 319 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 Q96MT0 163 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 CD244Q9BZW8 370 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 OR51E2Q9H255 320 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 RUBCNLQ9H714 662 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 PRM3Q9NNZ6 103 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 KRT84Q9NSB2 600 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 MTMR11A4FU01 709 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 M0R082 166 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 RFXANKO14593 260 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 NTRK1P04629 796 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 INHAP05111 366 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 HSMCR30P0CW71 290 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 SDC1P18827 310 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 RPP38P78345 283 aaKnown RBP11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 ILF2Q12905 390 aaKnown RBP11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 RTP2Q5QGT7 225 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 ZNF648Q5T619 568 aaPredicted RBP11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 SYT6Q5T7P8 510 aaPredicted RBP11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 KDM4DQ6B0I6 523 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 DESI1Q6ICB0 168 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 SNX20Q7Z614 316 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 TSPAN33Q86UF1 283 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 HORMAD1Q86X24 394 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 HIPK1Q86Z02 1210 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 FBLIM1Q8WUP2 373 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 LINC01599Q8WXQ3 324 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 FOXJ1Q92949 421 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 POM121Q96HA1 1249 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 PSD2Q9BQI7 771 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 BBS2Q9BXC9 721 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 FBXO8Q9NRD0 319 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 RAD18Q9NS91 495 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 RLIMQ9NVW2 624 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 C14orf119Q9NWQ9 140 aa11.61□□□□□ -0.55
CCDC144CP-201ENST00000340196 VWA8A3KMH1 1905 aa11.6□□□□□ -0.55
CCDC144CP-201ENST00000340196 LINC00854A0A1B0GVQ3 168 aa11.6□□□□□ -0.55
CCDC144CP-201ENST00000340196 SMAD6O43541 496 aaKnown RBP11.6□□□□□ -0.55
CCDC144CP-201ENST00000340196 OAZ2O95190 189 aa11.6□□□□□ -0.55
CCDC144CP-201ENST00000340196 IL6P05231 212 aa11.6□□□□□ -0.55
CCDC144CP-201ENST00000340196 RETP07949 1114 aa11.6□□□□□ -0.55
CCDC144CP-201ENST00000340196 ADRA2AP08913 450 aa11.6□□□□□ -0.55
CCDC144CP-201ENST00000340196 CHRNB1P11230 501 aa11.6□□□□□ -0.55
CCDC144CP-201ENST00000340196 POU2F1P14859 743 aa11.6□□□□□ -0.55
CCDC144CP-201ENST00000340196 SERPINB1P30740 379 aa11.6□□□□□ -0.55
CCDC144CP-201ENST00000340196 LRRC66Q68CR7 880 aa11.6□□□□□ -0.55
CCDC144CP-201ENST00000340196 ZNF621Q6ZSS3 439 aa11.6□□□□□ -0.55
CCDC144CP-201ENST00000340196 RFPL4BQ6ZWI9 263 aa11.6□□□□□ -0.55
CCDC144CP-201ENST00000340196 HEATR4Q86WZ0 1026 aa11.6□□□□□ -0.55
CCDC144CP-201ENST00000340196 CCDC103Q8IW40 242 aa11.6□□□□□ -0.55
CCDC144CP-201ENST00000340196 PLPP6Q8IY26 295 aa11.6□□□□□ -0.55
CCDC144CP-201ENST00000340196 ZNF784Q8NCA9 323 aaPredicted RBP11.6□□□□□ -0.55
CCDC144CP-201ENST00000340196 RHOXF1Q8NHV9 184 aa11.6□□□□□ -0.55
CCDC144CP-201ENST00000340196 ZNF296Q8WUU4 475 aaPredicted RBP11.6□□□□□ -0.55
CCDC144CP-201ENST00000340196 HMX1Q9NP08 348 aaPredicted RBP11.6□□□□□ -0.55
CCDC144CP-201ENST00000340196 AASDHPPTQ9NRN7 309 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms