RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 FAM9CQ8IZT9 166 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 KRTCAP2Q8N6L1 136 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 OR4A15Q8NGL6 344 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 FRS2Q8WU20 508 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 PHF10Q8WUB8 498 aaKnown RBP6.31□□□□□ -1.4
HMG20A-201ENST00000336216 ATL1Q8WXF7 558 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 PPCDCQ96CD2 204 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 CXorf40BQ96DE9 158 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 C1orf74Q96LT6 269 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 COQ7Q99807 217 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 TEX12Q9BXU0 123 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 NLNQ9BYT8 704 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 MAGEE1Q9HCI5 957 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 INTS10Q9NVR2 710 aaKnown RBP6.31□□□□□ -1.4
HMG20A-201ENST00000336216 C1orf109Q9NX04 203 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 TBC1D14Q9P2M4 693 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 CNOT11Q9UKZ1 510 aaKnown RBP6.31□□□□□ -1.4
HMG20A-201ENST00000336216 GTF2A1LQ9UNN4 478 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 LOXHD1Q8IVV2 1947 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 CACNA1GO43497 2377 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 CACNA1IQ9P0X4 2223 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 LCHNA4D1U4 455 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 TTC34A8MYJ7 566 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 RHOP08100 348 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 HPGDP15428 266 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 PPP2R1BP30154 601 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 NUDT6P53370 316 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 NFATC2Q13469 925 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 SF3B4Q15427 424 aaKnown RBP eCLIP6.3□□□□□ -1.4
HMG20A-201ENST00000336216 C9orf64Q5T6V5 341 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 IER5LQ5T953 404 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 RFLNAQ6ZTI6 216 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 GOLGA7Q7Z5G4 137 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 MRPL10Q7Z7H8 261 aaKnown RBP6.3□□□□□ -1.4
HMG20A-201ENST00000336216 EPHX4Q8IUS5 362 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 PRSS58Q8IYP2 241 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 NDNFQ8TB73 568 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 S100ZQ8WXG8 99 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 BADQ92934 168 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 KIAA1191Q96A73 305 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 TCEAL4Q96EI5 215 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 SPACA7Q96KW9 195 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 NSMCE3Q96MG7 304 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 ZNF347Q96SE7 839 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 SLC30A3Q99726 388 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 CLSTN3Q9BQT9 956 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 TDRD1Q9BXT4 1180 aaKnown RBP6.3□□□□□ -1.4
HMG20A-201ENST00000336216 BEX2Q9BXY8 128 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 KATNBL1Q9H079 304 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 TUBA8Q9NY65 449 aaPredicted RBP6.3□□□□□ -1.4
HMG20A-201ENST00000336216 TMEM181Q9P2C4 612 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 MAP10Q9P2G4 905 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 ERVK-18Q9QC07 812 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 FBXW2Q9UKT8 454 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 KCNK6Q9Y257 313 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 BTBD3Q9Y2F9 522 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 N6AMT1Q9Y5N5 214 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 SHROOM3Q8TF72 1996 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 OR10H3O60404 316 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 MITFO75030 526 aaPredicted RBP6.3□□□□□ -1.4
HMG20A-201ENST00000336216 DNTTP04053 509 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 IL6P05231 212 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 CD1DP15813 335 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 CD36P16671 472 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 ZNF24P17028 368 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 ATF6P18850 670 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 NOS3P29474 1203 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 RYKP34925 604 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 IDUAP35475 653 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 SCN1AP35498 2009 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 MAGEA11P43364 429 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 LEPRP48357 1165 aaKnown RBP6.3□□□□□ -1.4
HMG20A-201ENST00000336216 KCNC1P48547 511 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 SGSHP51688 502 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 CTBSQ01459 385 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 SPIBQ01892 262 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 RUNX1T1Q06455 604 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 SLC36A3Q495N2 470 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 C6orf136Q5SQH8 315 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 C6orf141Q5SZD1 244 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 SULT1C3Q6IMI6 304 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 PDE12Q6L8Q7 609 aaKnown RBP6.3□□□□□ -1.4
HMG20A-201ENST00000336216 CNKSR3Q6P9H4 555 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 FUNDC1Q8IVP5 155 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 SCML4Q8N228 414 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 CPA6Q8N4T0 437 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 C1orf52Q8N6N3 182 aaKnown RBP6.3□□□□□ -1.4
HMG20A-201ENST00000336216 PACRGLQ8N7B6 248 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 STON2Q8WXE9 905 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 JPH3Q8WXH2 748 aaPredicted RBP6.3□□□□□ -1.4
HMG20A-201ENST00000336216 RPL3LQ92901 407 aaKnown RBP6.3□□□□□ -1.4
HMG20A-201ENST00000336216 TOP1MTQ969P6 601 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 GTPBP3Q969Y2 492 aaKnown RBP6.3□□□□□ -1.4
HMG20A-201ENST00000336216 TP53INP1Q96A56 240 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 IL17FQ96PD4 163 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 VPS35Q96QK1 796 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 DPEP2Q9H4A9 486 aa6.3□□□□□ -1.4
HMG20A-201ENST00000336216 FARSBQ9NSD9 589 aaKnown RBP6.3□□□□□ -1.4
HMG20A-201ENST00000336216 PDP1Q9P0J1 537 aaPredicted RBP6.3□□□□□ -1.4
HMG20A-201ENST00000336216 ITGB1BP2Q9UKP3 347 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms