RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 RNF181Q9P0P0 153 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 OGDHLQ9ULD0 1010 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 NDRG4Q9ULP0 352 aaKnown RBP10.84□□□□□ -0.67
PTPN7-201ENST00000309017 ERVW-1Q9UQF0 538 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 NOD1Q9Y239 953 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 NEUROG3Q9Y4Z2 214 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 MYCP01106 439 aaPredicted RBP10.84□□□□□ -0.67
PTPN7-201ENST00000309017 C9P02748 559 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 ALPIP09923 528 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 MAPK1P28482 360 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 GJA5P36382 358 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 BMPR1AP36894 532 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 CLCN7P51798 805 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 CASP9P55211 416 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 CACNG1Q06432 222 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 VMACQ2NL98 169 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 CTXN3Q4LDR2 81 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 ASCC1Q8N9N2 400 aaKnown RBP10.84□□□□□ -0.67
PTPN7-201ENST00000309017 FAM193BQ96PV7 902 aaPredicted RBP10.84□□□□□ -0.67
PTPN7-201ENST00000309017 TRIB3Q96RU7 358 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 MGME1Q9BQP7 344 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 CENPOQ9BU64 300 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 EMILIN2Q9BXX0 1053 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 OR2B2Q9GZK3 357 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 RAD18Q9NS91 495 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 OLA1Q9NTK5 396 aaKnown RBP10.84□□□□□ -0.67
PTPN7-201ENST00000309017 SPASTQ9UBP0 616 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 PADI3Q9ULW8 664 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 PAPPA2Q9BXP8 1791 aa10.83□□□□□ -0.67
PTPN7-201ENST00000309017 WDR90Q96KV7 1748 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 KRT87PA6NCN2 255 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 SUV39H1O43463 412 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 SSX4O60224 188 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 PDYNP01213 254 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 CLCN4P51793 760 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 SLC14A1Q13336 389 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 CXCL17Q6UXB2 119 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 GALNT12Q8IXK2 581 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 ZNF683Q8IZ20 524 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 CHPFQ8IZ52 775 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 FATE1Q969F0 183 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 TADA1Q96BN2 335 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 SUSD3Q96L08 255 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 TTYH2Q9BSA4 534 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 PCDHB1Q9Y5F3 818 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 N6AMT1Q9Y5N5 214 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 TBKBP1A7MCY6 615 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 TNFRSF11BO00300 401 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 CTDSP2O14595 271 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 AREL1O15033 823 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 BNIP3LO60238 219 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 WBP4O75554 376 aaKnown RBP10.83□□□□□ -0.68
PTPN7-201ENST00000309017 OPN1SWP03999 348 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 ANXA5P08758 320 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 ITGALP20701 1170 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 ARPC4P59998 168 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 ST3GAL4Q11206 333 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 DENND1CQ8IV53 801 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 UBASH3BQ8TF42 649 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 POP5Q969H6 163 aaKnown RBP10.83□□□□□ -0.68
PTPN7-201ENST00000309017 TMEM246Q9BRR3 403 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 CDADC1Q9BWV3 514 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 ACPTQ9BZG2 426 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 TM6SF2Q9BZW4 377 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 MAGEH1Q9H213 219 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 MKLN1Q9UL63 735 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 UGT2A1Q9Y4X1 527 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 LYVE1Q9Y5Y7 322 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 LOC285556D6RIA3 1793 aa10.83□□□□□ -0.68
PTPN7-201ENST00000309017 MAGEB17A8MXT2 336 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 TAPBPO15533 448 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 KIAA0513O60268 411 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 SLC11A2P49281 568 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 DGKEP52429 567 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 CLDN8P56748 225 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 RHOAP61586 193 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 CSNK2BP67870 215 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 ZXDBP98169 803 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 RUNX1T1Q06455 604 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 BCL7AQ4VC05 210 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 ATAD3CQ5T2N8 411 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 ZNF517Q6ZMY9 492 aaPredicted RBP10.82□□□□□ -0.68
PTPN7-201ENST00000309017 ZNF598Q86UK7 904 aaKnown RBP10.82□□□□□ -0.68
PTPN7-201ENST00000309017 RAB43Q86YS6 212 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 FAM9CQ8IZT9 166 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 DNAJB8Q8NHS0 232 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 BTBD2Q9BX70 525 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 NMRK2Q9NPI5 230 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 DYRK4Q9NR20 520 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 SIRT5Q9NXA8 310 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 IGLV3-10A0A075B6K4 115 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 FAM172BPA6NC97 362 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 M0QZQ0 153 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 WDR47O94967 919 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 HIST1H2AGP0C0S8 130 aaPredicted RBP10.82□□□□□ -0.68
PTPN7-201ENST00000309017 EBLN1P0CF75 366 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 PRPS2P11908 318 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 HIST1H2ADP20671 130 aa10.82□□□□□ -0.68
PTPN7-201ENST00000309017 HOXD9P28356 352 aaPredicted RBP10.82□□□□□ -0.68
PTPN7-201ENST00000309017 HOXA9P31269 272 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms