RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 ERVK13-1Q9NX77 482 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 SPATA2Q9UM82 520 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 ILVBLA1L0T0 632 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 DYTNA2CJ06 578 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 RTCAO00442 366 aaKnown RBP12.93□□□□□ -0.34
CASC4-201ENST00000299957 PCDH7O60245 1069 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 ERN1O75460 977 aaKnown RBP12.93□□□□□ -0.34
CASC4-201ENST00000299957 GADD45GO95257 159 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 IFI30P13284 250 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 HTR1EP28566 365 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 ADRA1AP35348 466 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 RCAN2Q14206 197 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 GRM2Q14416 872 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 ATP13A5Q4VNC0 1218 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 RUNDC3AQ59EK9 446 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 SMARCD3Q6STE5 483 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 Q6ZSR9 355 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 SERINC5Q86VE9 423 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 L3HYPDHQ96EM0 354 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 ZNF558Q96NG5 402 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 OR2AG1Q9H205 316 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 SEMA3GQ9NS98 782 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 ARMC1Q9NVT9 282 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 COL16A1Q07092 1604 aaPredicted RBP12.93□□□□□ -0.34
CASC4-201ENST00000299957 MTHFD2P13995 350 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 TGFBR1P36897 503 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 RELAQ04206 551 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 ILF2Q12905 390 aaKnown RBP12.93□□□□□ -0.34
CASC4-201ENST00000299957 SNAPC1Q16533 368 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 TPRG1LQ5T0D9 272 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 TMEM126BQ8IUX1 230 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 SPARTQ8N0X7 666 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 SCML4Q8N228 414 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 POLR2J2Q9GZM3 115 aaKnown RBP12.93□□□□□ -0.34
CASC4-201ENST00000299957 PRSS21Q9Y6M0 314 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 CASKO14936 926 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 C9P02748 559 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 TCF3P15923 654 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 ZNF33AQ06730 810 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 SLC36A3Q495N2 470 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 RBM48Q5RL73 367 aaKnown RBP12.92□□□□□ -0.34
CASC4-201ENST00000299957 GPRC6AQ5T6X5 926 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 FAM171BQ6P995 826 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 PGBD3Q8N328 593 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 PGAP3Q96FM1 320 aaPredicted RBP12.92□□□□□ -0.34
CASC4-201ENST00000299957 MRPL9Q9BYD2 267 aaKnown RBP12.92□□□□□ -0.34
CASC4-201ENST00000299957 MRM3Q9HC36 420 aaKnown RBP12.92□□□□□ -0.34
CASC4-201ENST00000299957 GPR83Q9NYM4 423 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 B4GALT6Q9UBX8 382 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 PCDHGA11Q9Y5H2 935 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 CACNA1IQ9P0X4 2223 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.92□□□□□ -0.34
CASC4-201ENST00000299957 STC2O76061 302 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 PENKP01210 267 aaPredicted RBP12.92□□□□□ -0.34
CASC4-201ENST00000299957 RPL26P61254 145 aaKnown RBP12.92□□□□□ -0.34
CASC4-201ENST00000299957 RPS13P62277 151 aaKnown RBP12.92□□□□□ -0.34
CASC4-201ENST00000299957 PTSQ03393 145 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 SFSWAPQ12872 951 aaKnown RBP12.92□□□□□ -0.34
CASC4-201ENST00000299957 TARDBPQ13148 414 aaKnown RBP eCLIP12.92□□□□□ -0.34
CASC4-201ENST00000299957 GPR17Q13304 367 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 PDCD4Q53EL6 469 aaKnown RBP12.92□□□□□ -0.34
CASC4-201ENST00000299957 NOXRED1Q6NXP6 359 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 OMA1Q96E52 524 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 FEVQ99581 238 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 TRMT61BQ9BVS5 477 aaKnown RBP12.92□□□□□ -0.34
CASC4-201ENST00000299957 FNDC11Q9BVV2 318 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 CCNB1IP1Q9NPC3 277 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 PAK1IP1Q9NWT1 392 aaPredicted RBP12.92□□□□□ -0.34
CASC4-201ENST00000299957 KIAA1522Q9P206 1035 aaPredicted RBP12.92□□□□□ -0.34
CASC4-201ENST00000299957 YIPF1Q9Y548 306 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 TRAV19A0A0A6YYK7 116 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 HHLA1C9JL84 531 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 STX16O14662 325 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 SYN3O14994 580 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 C6orf47O95873 294 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 NUDT7P0C024 238 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 ACRP10323 421 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 LAMP1P11279 417 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 SGSHP51688 502 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 SLBPQ14493 270 aaKnown RBP eCLIP12.92□□□□□ -0.34
CASC4-201ENST00000299957 C11orf91Q3C1V1 193 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 ARSIQ5FYB1 569 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 PLPP4Q5VZY2 271 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 CXorf57Q6NSI4 855 aaKnown RBP12.92□□□□□ -0.34
CASC4-201ENST00000299957 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.92□□□□□ -0.34
CASC4-201ENST00000299957 NLGN4XQ8N0W4 816 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 GLB1L3Q8NCI6 653 aaPredicted RBP12.92□□□□□ -0.34
CASC4-201ENST00000299957 C8orf48Q96LL4 319 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 IL17FQ96PD4 163 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 TSPAN18Q96SJ8 248 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 SLC35A5Q9BS91 424 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 ZC4H2Q9NQZ6 224 aa12.92□□□□□ -0.34
CASC4-201ENST00000299957 KDELR3O43731 214 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 EPOP01588 193 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 IFNW1P05000 195 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 FCER2P06734 321 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 PRPS2P11908 318 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 DNAJA1P31689 397 aaKnown RBP12.91□□□□□ -0.34
CASC4-201ENST00000299957 CD83Q01151 205 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 ST3GAL4Q11206 333 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms