RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 PIGWQ7Z7B1 504 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 PLD3Q8IV08 490 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 CLYBLQ8N0X4 340 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 ARL10Q8N8L6 244 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 OR4C6Q8NH72 309 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 FLVCR1-AS1Q8TAF5 88 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 HMGCLL1Q8TB92 370 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 METTL6Q8TCB7 284 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 ZNF473Q8WTR7 871 aaKnown RBP9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 ZFPM2Q8WW38 1151 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 SLC5A11Q8WWX8 675 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 APOLD1Q96LR9 279 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 C3orf30Q96M34 536 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 PRAP1Q96NZ9 151 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 OR2A14Q96R47 310 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 RAB11FIP5Q9BXF6 653 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 TRIM55Q9BYV6 548 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 NSRP1Q9H0G5 558 aaKnown RBP9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 TUBB1Q9H4B7 451 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 WDR55Q9H6Y2 383 aaPredicted RBP9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 SLC6A20Q9NP91 592 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 HRASLS2Q9NWW9 162 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 PSD3Q9NYI0 1048 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 OR6C2Q9NZP2 312 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 GIMAP2Q9UG22 337 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 PADI4Q9UM07 663 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 DNAJC15Q9Y5T4 150 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 USH1CQ9Y6N9 552 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 MDC1Q14676 2089 aaKnown RBP9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 KCNE1BA0A087WTH5 132 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 FEZF1A0PJY2 475 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 CPED1A4D0V7 1026 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 SRRM3A6NNA2 597 aaPredicted RBP9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 DLL1O00548 723 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 NDUFAB1O14561 156 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 GIPC1O14908 333 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 PIP5K1BO14986 540 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 B4GAT1O43505 415 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 KDM1AO60341 852 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 SNX3O60493 162 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 DIAPH2O60879 1101 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 UBXN7O94888 489 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 FGF4P08620 206 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 LINC00032P0C843 101 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 EBLN1P0CF75 366 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 C1GALT1C1LP0DN25 315 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 TROVE2P10155 538 aaKnown RBP eCLIP9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 UROSP10746 265 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 PVRP15151 417 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 UGT2B7P16662 529 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 CCND1P24385 295 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 HMOX2P30519 316 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 LSSP48449 732 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 NAA20P61599 178 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 PRDX1Q06830 199 aaKnown RBP9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 COL9A2Q14055 689 aaPredicted RBP9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 SLBPQ14493 270 aaKnown RBP eCLIP9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 ABRAXAS2Q15018 415 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 ZRSR2Q15696 482 aaKnown RBP9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 AMZ1Q400G9 498 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 ZCCHC8Q6NZY4 707 aaKnown RBP9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 GUSBP11Q6P575 273 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 NXPE4Q6UWF7 544 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 C17orf64Q86WR6 236 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 DDIASQ8IXT1 998 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 L3MBTL4Q8NA19 623 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 OR2L3Q8NG85 312 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 TWIST2Q8WVJ9 160 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 TMEM120AQ9BXJ8 343 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 STN1Q9H668 368 aaKnown RBP9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 MRPS30Q9NP92 439 aaKnown RBP9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 PARD6AQ9NPB6 346 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 ACTR10Q9NZ32 417 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 ZNF490Q9ULM2 529 aaPredicted RBP9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 PCDHB11Q9Y5F2 797 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 ATP6AP2A0A1C7CYW4 349 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 OR5K3A6NET4 321 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 MANBAO00462 879 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 CDX4O14627 284 aaPredicted RBP9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 HGSO14964 777 aaPredicted RBP9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 HDAC3O15379 428 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 YKT6O15498 198 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 KIF1CO43896 1103 aaKnown RBP9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 PCDHGA12O60330 932 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 SH3BGRLO75368 114 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 ATP6AP2O75787 350 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 TGDSO95455 350 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 PDYNP01213 254 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 STATHP02808 62 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 PROS1P07225 676 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 ZNF806P0C7X5 589 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 ALPPL2P10696 532 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 JUPP14923 745 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 AMD1P17707 334 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 EPHA3P29320 983 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 GRIA3P42263 894 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 IDH3AP50213 366 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 TERF2Q15554 542 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 PERM1Q5SV97 790 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms