RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 BHLHE22Q8NFJ8 381 aaPredicted RBP18.25■□□□□ 0.51
TRIM47-201ENST00000254816 CCL4L1Q8NHW4 92 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 BIRC7Q96CA5 298 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 APIPQ96GX9 242 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 SLC39A3Q9BRY0 314 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 MENTQ9BUN1 341 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 SCHIP1Q9P0W5 487 aaPredicted RBP18.25■□□□□ 0.51
TRIM47-201ENST00000254816 MAP10Q9P2G4 905 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 PCDHGA7Q9Y5G6 932 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 KLHL33A6NCF5 533 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 PRR19A6NJB7 356 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 IGLV3-19P01714 112 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 RPN2P04844 631 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 HOXC4P09017 264 aaPredicted RBP18.25■□□□□ 0.51
TRIM47-201ENST00000254816 PCNAP12004 261 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 MRPL19P49406 292 aaKnown RBP18.25■□□□□ 0.51
TRIM47-201ENST00000254816 POLR2JP52435 117 aaKnown RBP18.25■□□□□ 0.51
TRIM47-201ENST00000254816 KCNK10P57789 538 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 PSME3P61289 254 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 KIAA0040Q15053 153 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 GRAMD1BQ3KR37 738 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 ZFAND4Q86XD8 727 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 SYNPOQ8N3V7 929 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 CLHC1Q8NHS4 586 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 VCXQ9H320 206 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 PRM3Q9NNZ6 103 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 WSB2Q9NYS7 404 aaPredicted RBP18.25■□□□□ 0.51
TRIM47-201ENST00000254816 GPRC5BQ9NZH0 403 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 ADA2Q9NZK5 511 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 ZIM2Q9NZV7 527 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 EIF3LQ9Y262 564 aaKnown RBP18.25■□□□□ 0.51
TRIM47-201ENST00000254816 NDUFAF1Q9Y375 327 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 TDRD6O60522 2096 aaKnown RBP18.24■□□□□ 0.51
TRIM47-201ENST00000254816 MAGEA13PA6NCF6 341 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 ASPDHA6ND91 283 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 ANKRD28O15084 1053 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 ANGPT2O15123 496 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 HNF4AP41235 474 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 ZP2Q05996 745 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 GRIK2Q13002 908 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 RCAN2Q14206 197 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 PRAMEF14Q5SWL7 426 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 PRAMEF13Q5VWM6 474 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 KIAA0895LQ68EN5 471 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 OR52E8Q6IFG1 317 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 Q6ZSR6 202 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 ADHFE1Q8IWW8 467 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 TBC1D21Q8IYX1 336 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 MAGEB10Q96LZ2 347 aaPredicted RBP18.24■□□□□ 0.51
TRIM47-201ENST00000254816 YIPF3Q9GZM5 350 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 SPNS1Q9H2V7 528 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 MRPS17Q9Y2R5 130 aaKnown RBP18.24■□□□□ 0.51
TRIM47-201ENST00000254816 C10orf142B7Z368 130 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 EML2O95834 649 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 LYNP07948 512 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 ME2P23368 584 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 PSMB5P28074 263 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 HTR1BP28222 390 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 STARD6P59095 220 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 TIGD2Q4W5G0 525 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 DEFB119Q8N690 84 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 TMEM145Q8NBT3 493 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 OR13H1Q8NG92 308 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 SLC5A11Q8WWX8 675 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 TMEM168Q9H0V1 697 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 XKR8Q9H6D3 395 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 WNT16Q9UBV4 365 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 DLGAP4Q9Y2H0 992 aa18.24■□□□□ 0.51
TRIM47-201ENST00000254816 H0YIV9 168 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 PI15O43692 258 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 APBB3O95704 486 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 CTBSQ01459 385 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 PCDH1Q08174 1060 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 SLBPQ14493 270 aaKnown RBP eCLIP18.23■□□□□ 0.51
TRIM47-201ENST00000254816 SF1Q15637 639 aaKnown RBP18.23■□□□□ 0.51
TRIM47-201ENST00000254816 PUS10Q3MIT2 529 aaKnown RBP18.23■□□□□ 0.51
TRIM47-201ENST00000254816 RNF220Q5VTB9 566 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 PQLC1Q8N2U9 271 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 OR7G3Q8NG95 312 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 SNX19Q92543 992 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 NR1H4Q96RI1 486 aaPredicted RBP18.23■□□□□ 0.51
TRIM47-201ENST00000254816 VCX3BQ9H321 246 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 TBC1D29Q9UFV1 150 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 TAC3Q9UHF0 121 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 INVSQ9Y283 1065 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 SLCO1B1Q9Y6L6 691 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 PLXND1Q9Y4D7 1925 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 CROCCQ5TZA2 2017 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 CCDC154A6NI56 674 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 BBIP1A8MTZ0 92 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 MAGEB17A8MXT2 336 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 RASGRP1O95267 797 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 C1GALT1C1LP0DN25 315 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 ERGP11308 486 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 CDH1P12830 882 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 CD6P30203 668 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 CASP2P42575 452 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 IRX1P78414 480 aaPredicted RBP18.23■□□□□ 0.51
TRIM47-201ENST00000254816 MAD2L1Q13257 205 aaPredicted RBP18.23■□□□□ 0.51
TRIM47-201ENST00000254816 KRT33BQ14525 404 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms