RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 HNRNPA1L2Q32P51 320 aaKnown RBP10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 PLXDC1Q8IUK5 500 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 CLVS1Q8IUQ0 354 aaPredicted RBP10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 TDHQ8IZJ6 230 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 VN1R2Q8NFZ6 395 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 OR56A1Q8NGH5 318 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 SHKBP1Q8TBC3 707 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 CRISPLD1Q9H336 500 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 CSNK1G1Q9HCP0 422 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 ELOA3DA6NLF2 546 aaPredicted RBP10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 SCDO00767 359 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 GSC2O15499 205 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 OR1I1O60431 355 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 TIPRLO75663 272 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 CCNB2O95067 398 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 MYL9P24844 172 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 RBMS1P29558 406 aaKnown RBP10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 CLCN4P51793 760 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 DSTNP60981 165 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 SLC10A2Q12908 348 aaPredicted RBP10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 SNTA1Q13424 505 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 ELOA3BQ3SY89 546 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 PDSS1Q5T2R2 415 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 CXXC5Q7LFL8 322 aaKnown RBP10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 ELOA3Q8NG57 546 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 OR4K17Q8NGC6 315 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 TSACCQ96A04 125 aaPredicted RBP10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 MRPL38Q96DV4 380 aaKnown RBP10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 ZNF347Q96SE7 839 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 GPATCH1Q9BRR8 931 aaKnown RBP10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 XKR8Q9H6D3 395 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 FZD3Q9NPG1 666 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 KLF15Q9UIH9 416 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 ANKRD36CQ5JPF3 1778 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 LINC01553A4QN01 128 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 TRIM43BA6NCK2 446 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 PRAMEF26H0Y7S4 382 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 PSMD11O00231 422 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 NME6O75414 186 aaPredicted RBP10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 IGFBP5P24593 272 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 DSC1Q08554 894 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 SCARB2Q14108 478 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 ACSBG2Q5FVE4 666 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 TMPRSS11AQ6ZMR5 421 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 AMIGO1Q86WK6 493 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 HPS6Q86YV9 775 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 IL22RA1Q8N6P7 574 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 CHST14Q8NCH0 376 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 TGM7Q96PF1 710 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 KLRF1Q9NZS2 232 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 IKZF2Q9UKS7 526 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 PADI2Q9Y2J8 665 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 TJP1Q07157 1748 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 A8MUI8 341 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 HIDE1A8MVS5 230 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 H7BY64 318 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 STATHP02808 62 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 F7P08709 466 aaPredicted RBP10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 CYP4B1P13584 511 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 CDK9P50750 372 aaKnown RBP10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 SLC18A1P54219 525 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 VSX2P58304 361 aaPredicted RBP10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 ENPP2Q13822 863 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 LIPJQ5W064 366 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 ZCCHC12Q6PEW1 402 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 ALKAL1Q6UXT8 129 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 ASPGQ86U10 573 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 CAND1Q86VP6 1230 aaKnown RBP10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 PQLC1Q8N2U9 271 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 TMEM130Q8N3G9 435 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 ISG20Q96AZ6 181 aaKnown RBP10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 MMABQ96EY8 250 aaPredicted RBP10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 PRAP1Q96NZ9 151 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 OR51B5Q9H339 312 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 AKTIPQ9H8T0 292 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 N4BP2Q86UW6 1770 aaPredicted RBP10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 EDN1P05305 212 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 CXCR1P25024 350 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 ITGB7P26010 798 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 MSX2P35548 267 aaPredicted RBP10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 ERVFC1P60507 584 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 SPANXN2Q5MJ10 180 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 FAM182AQ5T1J6 154 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 ARMC4Q5T2S8 1044 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 ZNF648Q5T619 568 aaPredicted RBP10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 PTCRAQ6ISU1 281 aaPredicted RBP10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 P4HA3Q7Z4N8 544 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 ZNF689Q96CS4 500 aaPredicted RBP10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 TCEAL4Q96EI5 215 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 GALNT8Q9NY28 637 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 MYH6P13533 1939 aa10.06□□□□□ -0.8
NIPAL3-201ENST00000003912 LOC100506127A0A0U1RQW1 187 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 C4BPBP20851 252 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 NIPAL4Q0D2K0 466 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 NDUFAF6Q330K2 333 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 CEP78Q5JTW2 689 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 RNASE11Q8TAA1 199 aaKnown RBP10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 MIEF2Q96C03 454 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 NUAK2Q9H093 628 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 ZBP1Q9H171 429 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms