RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Bhlha9Q5RJB0 231 aa19.83■□□□□ 0.77
Trim47-201ENSMUST00000021120 Caprin1Q60865 707 aaKnown RBP19.83■□□□□ 0.77
Trim47-201ENSMUST00000021120 Rbms3Q8BWL5 431 aaKnown RBP19.83■□□□□ 0.77
Trim47-201ENSMUST00000021120 IlkapQ8R0F6 392 aa19.83■□□□□ 0.77
Trim47-201ENSMUST00000021120 Olfr677Q8VF06 312 aa19.83■□□□□ 0.77
Trim47-201ENSMUST00000021120 Pcdha8Q91Y12 946 aa19.83■□□□□ 0.77
Trim47-201ENSMUST00000021120 Dio3Q91ZI8 304 aa19.83■□□□□ 0.77
Trim47-201ENSMUST00000021120 HnrnpllQ921F4 591 aaKnown RBP19.83■□□□□ 0.77
Trim47-201ENSMUST00000021120 Pycr2Q922Q4 320 aaKnown RBP19.83■□□□□ 0.77
Trim47-201ENSMUST00000021120 PpidQ9CR16 370 aaKnown RBP19.83■□□□□ 0.77
Trim47-201ENSMUST00000021120 Sec13Q9D1M0 322 aa19.83■□□□□ 0.77
Trim47-201ENSMUST00000021120 Sertad3Q9ERC3 197 aa19.83■□□□□ 0.77
Trim47-201ENSMUST00000021120 Jam2Q9JI59 298 aa19.83■□□□□ 0.77
Trim47-201ENSMUST00000021120 Katna1Q9WV86 491 aa19.83■□□□□ 0.77
Trim47-201ENSMUST00000021120 Gm45233A0A0N4SVE0 221 aa19.83■□□□□ 0.76
Trim47-201ENSMUST00000021120 Cldn34b1B1AZQ8 209 aa19.83■□□□□ 0.76
Trim47-201ENSMUST00000021120 Slc28a1E9PXX9 648 aa19.83■□□□□ 0.76
Trim47-201ENSMUST00000021120 Hoxd12P23812 268 aa19.83■□□□□ 0.76
Trim47-201ENSMUST00000021120 Hoxa2P31245 372 aa19.83■□□□□ 0.76
Trim47-201ENSMUST00000021120 Tgm3Q08189 693 aa19.83■□□□□ 0.76
Trim47-201ENSMUST00000021120 Jak2Q62120 1129 aa19.83■□□□□ 0.76
Trim47-201ENSMUST00000021120 Smad2Q62432 467 aa19.83■□□□□ 0.76
Trim47-201ENSMUST00000021120 NovQ64299 354 aa19.83■□□□□ 0.76
Trim47-201ENSMUST00000021120 Bend6Q6PFX2 281 aa19.83■□□□□ 0.76
Trim47-201ENSMUST00000021120 B430218F22RikQ8BQR5 223 aa19.83■□□□□ 0.76
Trim47-201ENSMUST00000021120 4932411N23RikQ8C0S0 470 aa19.83■□□□□ 0.76
Trim47-201ENSMUST00000021120 Pex5lQ8C437 567 aa19.83■□□□□ 0.76
Trim47-201ENSMUST00000021120 Pi4k2bQ8CBQ5 469 aa19.83■□□□□ 0.76
Trim47-201ENSMUST00000021120 Mat1aQ91X83 396 aaKnown RBP19.83■□□□□ 0.76
Trim47-201ENSMUST00000021120 Glod4Q9CPV4 298 aa19.83■□□□□ 0.76
Trim47-201ENSMUST00000021120 Serpinb11Q9CQV3 388 aa19.83■□□□□ 0.76
Trim47-201ENSMUST00000021120 Ppil1Q9D0W5 166 aa19.83■□□□□ 0.76
Trim47-201ENSMUST00000021120 Senp8Q9D2Z4 221 aa19.83■□□□□ 0.76
Trim47-201ENSMUST00000021120 9030624G23RikQ9D308 155 aa19.83■□□□□ 0.76
Trim47-201ENSMUST00000021120 Cldn34b2Q9D9N2 209 aa19.83■□□□□ 0.76
Trim47-201ENSMUST00000021120 Smok4aA0JLX3 433 aa19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Skint11A7XV14 364 aa19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 NapsaO09043 419 aa19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Pou5f1P20263 352 aaKnown RBP19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Gli1P47806 1111 aa19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Aqp1Q02013 269 aa19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Dsg4Q7TMD7 1041 aa19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Ppp1r3eQ8BRJ4 279 aa19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Bcl10Q9Z0H7 233 aa19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Catsperg2C6KI89 1145 aa19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Zfp558E9Q1J0 407 aa19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Gm17175E9Q528 179 aa19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Pold1P52431 1105 aa19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 InhbbQ04999 411 aa19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 SyncripQ7TMK9 623 aaKnown RBP19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Itln1bQ80ZA0 313 aa19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Teddm1aQ810U2 305 aa19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Zfp418Q8BFS8 652 aa19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Ppp1r1cQ8BKK4 108 aa19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Kiaa1671Q8BRV5 308 aa19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Ifi44Q8BV66 422 aa19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Pcdhb8Q91XZ2 779 aa19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Bbs2Q9CWF6 721 aa19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Pbld2Q9CXN7 288 aa19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Ilf2Q9CXY6 390 aaKnown RBP19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Vps35Q9EQH3 796 aaKnown RBP19.82■□□□□ 0.76
Trim47-201ENSMUST00000021120 Mki67E9PVX6 3177 aaKnown RBP19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 Klhl18A0A0G2JGN5 579 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 L3mbtl1A2A5N8 826 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 Ssxb6A2BI74 170 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 Map2k3O09110 347 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 Akap3O88987 864 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 Hoxa4P06798 285 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 PhexP70669 749 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 Xrra1Q3U3V8 786 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 BtrcQ3ULA2 605 aaKnown RBP19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 Lrrc8eQ66JT1 795 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 Fam126aQ6P9N1 521 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 Arhgef38Q80VK6 770 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 Prap1Q80XD8 149 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 Krr1Q8BGA5 380 aaKnown RBP19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 B3gnt5Q8BGY6 376 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 Cars2Q8BYM8 551 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 Gpr153Q8K0Z9 631 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 Txndc11Q8K2W3 948 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 PxnQ8VI36 591 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 AasdhpptQ9CQF6 309 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 Ints11Q9CWS4 600 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 Get4Q9D1H7 327 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 P33monoxQ9DBN4 303 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 PtsQ9R1Z7 144 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 Fkbp9Q9Z247 570 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 Ate1Q9Z2A5 516 aa19.81■□□□□ 0.76
Trim47-201ENSMUST00000021120 Ighv11-1A0A075B5R6 117 aa19.8■□□□□ 0.76
Trim47-201ENSMUST00000021120 Mcf2A2AEU1 1111 aa19.8■□□□□ 0.76
Trim47-201ENSMUST00000021120 TriqkB2B9E1 86 aa19.8■□□□□ 0.76
Trim47-201ENSMUST00000021120 Vmn2r38G3UYA8 861 aa19.8■□□□□ 0.76
Trim47-201ENSMUST00000021120 Vmn2r33K7N705 861 aa19.8■□□□□ 0.76
Trim47-201ENSMUST00000021120 Znf143O70230 638 aa19.8■□□□□ 0.76
Trim47-201ENSMUST00000021120 P01636 108 aa19.8■□□□□ 0.76
Trim47-201ENSMUST00000021120 Gstm1P10649 218 aa19.8■□□□□ 0.76
Trim47-201ENSMUST00000021120 Mcpt2P15119 244 aa19.8■□□□□ 0.76
Trim47-201ENSMUST00000021120 Tgm2P21981 686 aaKnown RBP19.8■□□□□ 0.76
Trim47-201ENSMUST00000021120 Slc2a3P32037 493 aaKnown RBP19.8■□□□□ 0.76
Trim47-201ENSMUST00000021120 Bmp8aP34821 399 aa19.8■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms