RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 COL21A1Q96P44 957 aa14.41□□□□□ -0.1
CACNA1A-220ENST00000635988 EPYCQ99645 322 aa14.41□□□□□ -0.1
CACNA1A-220ENST00000635988 ZBED2Q9BTP6 218 aa14.41□□□□□ -0.1
CACNA1A-220ENST00000635988 ELOVL2Q9NXB9 296 aa14.41□□□□□ -0.1
CACNA1A-220ENST00000635988 SPASTQ9UBP0 616 aa14.41□□□□□ -0.1
CACNA1A-220ENST00000635988 PCDHB8Q9UN66 801 aa14.41□□□□□ -0.1
CACNA1A-220ENST00000635988 PCDHGA6Q9Y5G7 932 aa14.41□□□□□ -0.1
CACNA1A-220ENST00000635988 PCDHGA3Q9Y5H0 932 aa14.41□□□□□ -0.1
CACNA1A-220ENST00000635988 KLK4Q9Y5K2 254 aa14.41□□□□□ -0.1
CACNA1A-220ENST00000635988 MICAL3Q7RTP6 2002 aa14.41□□□□□ -0.1
CACNA1A-220ENST00000635988 TRIP12Q14669 1992 aaPredicted RBP14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 SLC12A8A0AV02 714 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 DGKAP23743 735 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 UGT2B15P54855 530 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 OR2B6P58173 313 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 VLDLRP98155 873 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 PTRHD1Q6GMV3 140 aaKnown RBP14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 ZCCHC8Q6NZY4 707 aaKnown RBP14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 CBLL1Q75N03 491 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 DNAJC22Q8N4W6 341 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 BEND7Q8N7W2 519 aaPredicted RBP14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 SETD6Q8TBK2 473 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 ZNF675Q8TD23 568 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 UBE2FQ969M7 185 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 CRELD1Q96HD1 420 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 ZNF408Q9H9D4 720 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 FKBP14Q9NWM8 211 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 SLC45A1Q9Y2W3 748 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 N6AMT1Q9Y5N5 214 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 F5H5T6 163 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 PDHXO00330 501 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 SCO2O43819 266 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 HMBSP08397 361 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 TACR2P21452 398 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 HTR3AP46098 478 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 RGRP47804 291 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 PXNP49023 591 aaPredicted RBP14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 DMPKQ09013 629 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 TIMM50Q3ZCQ8 353 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 C10orf120Q5SQS8 335 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 RNF19BQ6ZMZ0 732 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 VASH1Q7L8A9 365 aaPredicted RBP14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 PLEKHH3Q7Z736 793 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 ZSWIM9Q86XI8 627 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 EFHBQ8N7U6 833 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 ASCC1Q8N9N2 400 aaKnown RBP14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 NPLOC4Q8TAT6 608 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 NELL1Q92832 810 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 TMCO6Q96DC7 493 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 CLPBQ9H078 707 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 BPIFA1Q9NP55 256 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 CFL2Q9Y281 166 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 FNDC3AQ9Y2H6 1198 aaKnown RBP14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 RAI2Q9Y5P3 530 aa14.4□□□□□ -0.1
CACNA1A-220ENST00000635988 A0A0D9SEW6 157 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 LOC100506127A0A0U1RQW1 187 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 LOC730098B7Z3J9 87 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 OR4Q2P0C623 313 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 ZNF7P17097 686 aaPredicted RBP14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 MAGP20916 626 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 C21orf33P30042 268 aaPredicted RBP14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 GGT2P36268 569 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 SLC15A1P46059 708 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 STARD3Q14849 445 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 EIF4HQ15056 248 aaKnown RBP14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 SDHAF4Q5VUM1 108 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 CCDC190Q86UF4 302 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 ANKRD46Q86W74 232 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 UBQLNLQ8IYU4 475 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 FLCNQ8NFG4 579 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 HSH2DQ96JZ2 352 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 FBXL12Q9NXK8 326 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 CRNNQ9UBG3 495 aaPredicted RBP14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 AGO1Q9UL18 857 aaKnown RBP14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 PCDHGB3Q9Y5G1 929 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 AP1M2Q9Y6Q5 423 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 KDELR3O43731 214 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 DIRAS1O95057 198 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 CLDN9O95484 217 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 TBX18O95935 607 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 RPS3P23396 243 aaKnown RBP eCLIP14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 TIE1P35590 1138 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 PIK3CBP42338 1070 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 LIMK1P53667 647 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 CSTF3Q12996 717 aaKnown RBP14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 TTC23LQ6PF05 361 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 ZZZ3Q8IYH5 903 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 CELF2-AS1Q8N7Q2 184 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 ST13P5Q8NFI4 369 aaPredicted RBP14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 RASSF5Q8WWW0 418 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 MYOCQ99972 504 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 SPON2Q9BUD6 331 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 CIPCQ9C0C6 399 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 AP5M1Q9H0R1 490 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 TLR8Q9NR97 1041 aaKnown RBP14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 TSR3Q9UJK0 312 aaKnown RBP14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 TRAPPC4Q9Y296 219 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 BTBD3Q9Y2F9 522 aa14.39□□□□□ -0.11
CACNA1A-220ENST00000635988 CENPXA8MT69 81 aa14.38□□□□□ -0.11
CACNA1A-220ENST00000635988 CLIC1O00299 241 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 236.5 ms