RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 MTO1Q9Y2Z2 717 aaKnown RBP16.08■□□□□ 0.16
UBE3D-208ENST00000626828 PABPN1LA6NDY0 278 aaKnown RBP16.07■□□□□ 0.16
UBE3D-208ENST00000626828 ATXN7O15265 892 aaPredicted RBP16.07■□□□□ 0.16
UBE3D-208ENST00000626828 NKX2-8O15522 239 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 PIAS1O75925 651 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 AGXTP21549 392 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 IMPA1P29218 277 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 STX2P32856 288 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 SPRP35270 261 aaPredicted RBP16.07■□□□□ 0.16
UBE3D-208ENST00000626828 RORAP35398 523 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 GP5P40197 560 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 ARSFP54793 590 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 CYP4F2P78329 520 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 DEFB110Q30KQ9 67 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 TAF1BQ53T94 588 aaPredicted RBP16.07■□□□□ 0.16
UBE3D-208ENST00000626828 THEMIS2Q5TEJ8 643 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 ICE2Q659A1 982 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 FBXO42Q6P3S6 717 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 TMEM207Q6UWW9 146 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 LRRC56Q8IYG6 542 aaPredicted RBP16.07■□□□□ 0.16
UBE3D-208ENST00000626828 PPFIBP2Q8ND30 876 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 FBF1Q8TES7 1133 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 IFT81Q8WYA0 676 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 STARD8Q92502 1023 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 TTC9Q92623 222 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 TSPAN17Q96FV3 270 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 NDC1Q9BTX1 674 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 PCBD2Q9H0N5 130 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 CHST8Q9H2A9 424 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 POPDC3Q9HBV1 291 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 PCMTD2Q9NV79 361 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 ANKMY1Q9P2S6 941 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 SRPK3Q9UPE1 567 aa16.07■□□□□ 0.16
UBE3D-208ENST00000626828 MDC1Q14676 2089 aaKnown RBP16.07■□□□□ 0.16
UBE3D-208ENST00000626828 TK2O00142 265 aa16.06■□□□□ 0.16
UBE3D-208ENST00000626828 ZSCAN9O15535 394 aaPredicted RBP16.06■□□□□ 0.16
UBE3D-208ENST00000626828 ENO2P09104 434 aaPredicted RBP16.06■□□□□ 0.16
UBE3D-208ENST00000626828 RAB40ALP0C0E4 278 aa16.06■□□□□ 0.16
UBE3D-208ENST00000626828 HRH2P25021 359 aa16.06■□□□□ 0.16
UBE3D-208ENST00000626828 PTPN4P29074 926 aa16.06■□□□□ 0.16
UBE3D-208ENST00000626828 PGGT1BP53609 377 aa16.06■□□□□ 0.16
UBE3D-208ENST00000626828 AP1S2P56377 157 aa16.06■□□□□ 0.16
UBE3D-208ENST00000626828 RELAQ04206 551 aa16.06■□□□□ 0.16
UBE3D-208ENST00000626828 NAB1Q13506 487 aa16.06■□□□□ 0.16
UBE3D-208ENST00000626828 FAM214AQ32MH5 1076 aa16.06■□□□□ 0.16
UBE3D-208ENST00000626828 KBTBD12Q3ZCT8 623 aa16.06■□□□□ 0.16
UBE3D-208ENST00000626828 SOWAHCQ53LP3 525 aaPredicted RBP16.06■□□□□ 0.16
UBE3D-208ENST00000626828 RHBDD2Q6NTF9 364 aa16.06■□□□□ 0.16
UBE3D-208ENST00000626828 AGTRAPQ6RW13 159 aa16.06■□□□□ 0.16
UBE3D-208ENST00000626828 RELL1Q8IUW5 271 aa16.06■□□□□ 0.16
UBE3D-208ENST00000626828 ZNF655Q8N720 491 aaPredicted RBP16.06■□□□□ 0.16
UBE3D-208ENST00000626828 PPM1NQ8N819 430 aa16.06■□□□□ 0.16
UBE3D-208ENST00000626828 RBBP8Q99708 897 aa16.06■□□□□ 0.16
UBE3D-208ENST00000626828 SELENOSQ9BQE4 189 aa16.06■□□□□ 0.16
UBE3D-208ENST00000626828 PLCD4Q9BRC7 762 aa16.06■□□□□ 0.16
UBE3D-208ENST00000626828 GPAMQ9HCL2 828 aa16.06■□□□□ 0.16
UBE3D-208ENST00000626828 ENAMQ9NRM1 1142 aa16.06■□□□□ 0.16
UBE3D-208ENST00000626828 STOX2Q9P2F5 926 aaPredicted RBP16.06■□□□□ 0.16
UBE3D-208ENST00000626828 TAC3Q9UHF0 121 aa16.06■□□□□ 0.16
UBE3D-208ENST00000626828 NOVA2Q9UNW9 492 aaKnown RBP16.06■□□□□ 0.16
UBE3D-208ENST00000626828 PIEZO2Q9H5I5 2752 aa16.06■□□□□ 0.16
UBE3D-208ENST00000626828 CCDC88CQ9P219 2028 aa16.06■□□□□ 0.16
UBE3D-208ENST00000626828 OR2A25A4D2G3 310 aa16.05■□□□□ 0.16
UBE3D-208ENST00000626828 CTSVO60911 334 aa16.05■□□□□ 0.16
UBE3D-208ENST00000626828 CREG1O75629 220 aa16.05■□□□□ 0.16
UBE3D-208ENST00000626828 C1QAP02745 245 aa16.05■□□□□ 0.16
UBE3D-208ENST00000626828 CD63P08962 238 aa16.05■□□□□ 0.16
UBE3D-208ENST00000626828 ZNF37AP17032 561 aaPredicted RBP16.05■□□□□ 0.16
UBE3D-208ENST00000626828 CCND1P24385 295 aa16.05■□□□□ 0.16
UBE3D-208ENST00000626828 PHBP35232 272 aa16.05■□□□□ 0.16
UBE3D-208ENST00000626828 YBX1P67809 324 aaKnown RBP16.05■□□□□ 0.16
UBE3D-208ENST00000626828 USP10Q14694 798 aaKnown RBP16.05■□□□□ 0.16
UBE3D-208ENST00000626828 GRM7Q14831 915 aa16.05■□□□□ 0.16
UBE3D-208ENST00000626828 TBR1Q16650 682 aa16.05■□□□□ 0.16
UBE3D-208ENST00000626828 PHKG1Q16816 387 aa16.05■□□□□ 0.16
UBE3D-208ENST00000626828 YOD1Q5VVQ6 348 aaPredicted RBP16.05■□□□□ 0.16
UBE3D-208ENST00000626828 C16orf46Q6P387 395 aa16.05■□□□□ 0.16
UBE3D-208ENST00000626828 CEP97Q8IW35 865 aa16.05■□□□□ 0.16
UBE3D-208ENST00000626828 PROKR1Q8TCW9 393 aa16.05■□□□□ 0.16
UBE3D-208ENST00000626828 ATL1Q8WXF7 558 aa16.05■□□□□ 0.16
UBE3D-208ENST00000626828 ZNF285Q96NJ3 590 aa16.05■□□□□ 0.16
UBE3D-208ENST00000626828 C17orf62Q9BQA9 187 aa16.05■□□□□ 0.16
UBE3D-208ENST00000626828 ARHGAP9Q9BRR9 750 aa16.05■□□□□ 0.16
UBE3D-208ENST00000626828 NLNQ9BYT8 704 aa16.05■□□□□ 0.16
UBE3D-208ENST00000626828 CCDC177Q9NQR7 707 aaPredicted RBP16.05■□□□□ 0.16
UBE3D-208ENST00000626828 TXLNGQ9NUQ3 528 aa16.05■□□□□ 0.16
UBE3D-208ENST00000626828 ABCF3Q9NUQ8 709 aa16.05■□□□□ 0.16
UBE3D-208ENST00000626828 TMEM184CQ9NVA4 438 aa16.05■□□□□ 0.16
UBE3D-208ENST00000626828 ARL15Q9NXU5 204 aa16.05■□□□□ 0.16
UBE3D-208ENST00000626828 MRPS18BQ9Y676 258 aaKnown RBP16.05■□□□□ 0.16
UBE3D-208ENST00000626828 A0A0J9YVX5 310 aa16.04■□□□□ 0.16
UBE3D-208ENST00000626828 EIF4E1BA6NMX2 242 aaKnown RBP16.04■□□□□ 0.16
UBE3D-208ENST00000626828 CTSBP07858 339 aa16.04■□□□□ 0.16
UBE3D-208ENST00000626828 STMN1P16949 149 aa16.04■□□□□ 0.16
UBE3D-208ENST00000626828 ALAS2P22557 587 aa16.04■□□□□ 0.16
UBE3D-208ENST00000626828 VSX2P58304 361 aaPredicted RBP16.04■□□□□ 0.16
UBE3D-208ENST00000626828 DCDP81605 110 aaKnown RBP16.04■□□□□ 0.16
UBE3D-208ENST00000626828 NAE1Q13564 534 aa16.04■□□□□ 0.16
UBE3D-208ENST00000626828 ERV3-1Q14264 604 aa16.04■□□□□ 0.16
UBE3D-208ENST00000626828 WASHC2DQ5SRD0 308 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms