RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 SYT12Q8IV01 421 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 SFTPA2Q8IWL1 248 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.33□□□□□ -1.88
LIG4-205ENST00000614526 C1orf52Q8N6N3 182 aaKnown RBP3.33□□□□□ -1.88
LIG4-205ENST00000614526 OR9A1PQ8NGU1 263 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 OR2L2Q8NH16 312 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 OR10A6Q8NH74 314 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 HUS1BQ8NHY5 278 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 HCAR2Q8TDS4 363 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 CANT1Q8WVQ1 401 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 SNX19Q92543 992 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 NAF1Q96HR8 494 aaKnown RBP3.33□□□□□ -1.88
LIG4-205ENST00000614526 MRGPRX1Q96LB2 322 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 PRAP1Q96NZ9 151 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 ZBTB18Q99592 522 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 PKP2Q99959 881 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 INPP5KQ9BT40 448 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 TPSD1Q9BZJ3 242 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 KLHL25Q9H0H3 589 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 CARS2Q9HA77 564 aaKnown RBP3.33□□□□□ -1.88
LIG4-205ENST00000614526 SLC52A3Q9NQ40 469 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 GID8Q9NWU2 228 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 GPRC5BQ9NZH0 403 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 VAPAQ9P0L0 249 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 TAC3Q9UHF0 121 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 TRPS1Q9UHF7 1281 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 LEF1Q9UJU2 399 aaPredicted RBP3.33□□□□□ -1.88
LIG4-205ENST00000614526 CA14Q9ULX7 337 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 ST14Q9Y5Y6 855 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 CROCCQ5TZA2 2017 aa3.33□□□□□ -1.88
LIG4-205ENST00000614526 ZFC3H1O60293 1989 aaKnown RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 FAM234BA2RU67 622 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 QSOX1O00391 747 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 LIN7AO14910 233 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 FKBP6O75344 327 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 ADH1BP00325 375 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 NTRK1P04629 796 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 PGRP06401 933 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 ENO2P09104 434 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 SLC35G4P0C7Q5 338 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 UBTFL6P0CB48 400 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 JUPP14923 745 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 SDC1P18827 310 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 NDUFV2P19404 249 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 IGFALSP35858 605 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 CDKN2CP42773 168 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 GSK3BP49841 420 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 GTF2A1P52655 376 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 AQP4P55087 323 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 OR4D2P58180 307 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 MC1RQ01726 317 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 DPTQ07507 201 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 ACSM2AQ08AH3 577 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 PPP1R8Q12972 351 aaKnown RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 KIAA0040Q15053 153 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 TLR1Q15399 786 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 HKDC1Q2TB90 917 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 SAMD4BQ5PRF9 694 aaKnown RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 ACSM2BQ68CK6 577 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 CAPN13Q6MZZ7 669 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 NOXRED1Q6NXP6 359 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 GCNT7Q6ZNI0 430 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 GALNT10Q86SR1 603 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 ZFAND4Q86XD8 727 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 MMP21Q8N119 569 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 OR7G3Q8NG95 312 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 MAGEC3Q8TD91 643 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 FIG4Q92562 907 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 USP7Q93009 1102 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 RAB7BQ96AH8 199 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 FBXL8Q96CD0 374 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 UHRF1Q96T88 793 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 INSM2Q96T92 566 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 KCTD14Q9BQ13 255 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 C19orf43Q9BQ61 176 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 ECSITQ9BQ95 431 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 BRINP2Q9C0B6 783 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 IKZF5Q9H5V7 419 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 FGF22Q9HCT0 170 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 CUEDC1Q9NWM3 386 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 SH3BP4Q9P0V3 963 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 TMEM181Q9P2C4 612 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 EPS15L1Q9UBC2 864 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 SUFUQ9UMX1 484 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 VPS4AQ9UN37 437 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 BTBD3Q9Y2F9 522 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 DGKBQ9Y6T7 804 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 LRRK1Q38SD2 2015 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 FRYLO94915 3013 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 KCNE1BA0A087WTH5 132 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 ANKRD28O15084 1053 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 PPM1DO15297 605 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 VEGFDO43915 354 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 BCAS2O75934 225 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 RASGRP1O95267 797 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 STAMBPO95630 424 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 EML2O95834 649 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 CEACAM5P06731 702 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 ZCCHC18P0CG32 403 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 MYCLP1P12525 358 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms