RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 GFM1Q96RP9 751 aaKnown RBP14.18□□□□□ -0.14
CD48-203ENST00000613788 GATA5Q9BWX5 397 aaPredicted RBP14.18□□□□□ -0.14
CD48-203ENST00000613788 SYNDIG1Q9H7V2 258 aa14.18□□□□□ -0.14
CD48-203ENST00000613788 MRPS30Q9NP92 439 aaKnown RBP14.18□□□□□ -0.14
CD48-203ENST00000613788 PCTPQ9UKL6 214 aa14.18□□□□□ -0.14
CD48-203ENST00000613788 POMT2Q9UKY4 750 aa14.18□□□□□ -0.14
CD48-203ENST00000613788 CDV3Q9UKY7 258 aaKnown RBP14.18□□□□□ -0.14
CD48-203ENST00000613788 ASB1Q9Y576 335 aa14.18□□□□□ -0.14
CD48-203ENST00000613788 GOLGA4Q13439 2230 aaKnown RBP14.17□□□□□ -0.14
CD48-203ENST00000613788 TM4SF5O14894 197 aa14.17□□□□□ -0.14
CD48-203ENST00000613788 CLGNO14967 610 aa14.17□□□□□ -0.14
CD48-203ENST00000613788 RFPL3O75679 317 aa14.17□□□□□ -0.14
CD48-203ENST00000613788 MLYCDO95822 493 aa14.17□□□□□ -0.14
CD48-203ENST00000613788 C9P02748 559 aa14.17□□□□□ -0.14
CD48-203ENST00000613788 CDH3P22223 829 aa14.17□□□□□ -0.14
CD48-203ENST00000613788 GRK2P25098 689 aa14.17□□□□□ -0.14
CD48-203ENST00000613788 PSMB5P28074 263 aa14.17□□□□□ -0.14
CD48-203ENST00000613788 SERPINB5P36952 375 aa14.17□□□□□ -0.14
CD48-203ENST00000613788 CLCQ05315 142 aa14.17□□□□□ -0.14
CD48-203ENST00000613788 SPIDRQ14159 915 aa14.17□□□□□ -0.14
CD48-203ENST00000613788 CHI3L2Q15782 390 aa14.17□□□□□ -0.14
CD48-203ENST00000613788 GOLGA7Q7Z5G4 137 aa14.17□□□□□ -0.14
CD48-203ENST00000613788 CARFQ8N187 725 aa14.17□□□□□ -0.14
CD48-203ENST00000613788 FLVCR1-AS1Q8TAF5 88 aa14.17□□□□□ -0.14
CD48-203ENST00000613788 RAB3IL1Q8TBN0 382 aa14.17□□□□□ -0.14
CD48-203ENST00000613788 SLC5A11Q8WWX8 675 aa14.17□□□□□ -0.14
CD48-203ENST00000613788 ATP6V1E2Q96A05 226 aa14.17□□□□□ -0.14
CD48-203ENST00000613788 TRMOQ9BU70 441 aa14.17□□□□□ -0.14
CD48-203ENST00000613788 IPPKQ9H8X2 491 aa14.17□□□□□ -0.14
CD48-203ENST00000613788 C1GALT1Q9NS00 363 aa14.17□□□□□ -0.14
CD48-203ENST00000613788 STK38LQ9Y2H1 464 aa14.17□□□□□ -0.14
CD48-203ENST00000613788 ANKRD12Q6UB98 2062 aa14.16□□□□□ -0.14
CD48-203ENST00000613788 A0A0J9YY10 115 aa14.16□□□□□ -0.14
CD48-203ENST00000613788 TLCD2A6NGC4 264 aa14.16□□□□□ -0.14
CD48-203ENST00000613788 NTN3O00634 580 aaPredicted RBP14.16□□□□□ -0.14
CD48-203ENST00000613788 GIPC1O14908 333 aa14.16□□□□□ -0.14
CD48-203ENST00000613788 NPHS1O60500 1241 aa14.16□□□□□ -0.14
CD48-203ENST00000613788 SERPINE1P05121 402 aa14.16□□□□□ -0.14
CD48-203ENST00000613788 FGF3P11487 239 aaPredicted RBP14.16□□□□□ -0.14
CD48-203ENST00000613788 CEACAM1P13688 526 aa14.16□□□□□ -0.14
CD48-203ENST00000613788 CDH13P55290 713 aa14.16□□□□□ -0.14
CD48-203ENST00000613788 CFHR1Q03591 330 aa14.16□□□□□ -0.14
CD48-203ENST00000613788 ATG16L1Q676U5 607 aa14.16□□□□□ -0.14
CD48-203ENST00000613788 OR4D9Q8NGE8 314 aa14.16□□□□□ -0.14
CD48-203ENST00000613788 NEIL2Q969S2 332 aa14.16□□□□□ -0.14
CD48-203ENST00000613788 ZUFSPQ96AP4 578 aa14.16□□□□□ -0.14
CD48-203ENST00000613788 NUDT22Q9BRQ3 303 aa14.16□□□□□ -0.14
CD48-203ENST00000613788 PITPNM3Q9BZ71 974 aa14.16□□□□□ -0.14
CD48-203ENST00000613788 SEMA6CQ9H3T2 930 aa14.16□□□□□ -0.14
CD48-203ENST00000613788 GSTO2Q9H4Y5 243 aa14.16□□□□□ -0.14
CD48-203ENST00000613788 NOL11Q9H8H0 719 aaKnown RBP14.16□□□□□ -0.14
CD48-203ENST00000613788 SEMA4BQ9NPR2 832 aaPredicted RBP14.16□□□□□ -0.14
CD48-203ENST00000613788 ATXN7L1Q9ULK2 861 aaPredicted RBP14.16□□□□□ -0.14
CD48-203ENST00000613788 SNX7Q9UNH6 387 aa14.16□□□□□ -0.14
CD48-203ENST00000613788 MN1Q10571 1320 aaPredicted RBP14.16□□□□□ -0.14
CD48-203ENST00000613788 TOX3O15405 576 aaPredicted RBP14.15□□□□□ -0.14
CD48-203ENST00000613788 MAP3K7O43318 606 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 RASSF9O75901 435 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 OTCP00480 354 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 BGNP21810 368 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 CSF2RBP32927 897 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 CCNG1P51959 295 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 GFERP55789 205 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 PPP1CAP62136 330 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 PCDH1Q08174 1060 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 STX3Q13277 289 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 RBBP7Q16576 425 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 CCDC157Q569K6 752 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 CACHD1Q5VU97 1274 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 KIAA1614Q5VZ46 1190 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 NXPE4Q6UWF7 544 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 ZCCHC23Q6ZST2 131 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 FAM92BQ6ZTR7 304 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 FRMD7Q6ZUT3 714 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 ABHD11Q8NFV4 315 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 OR6Y1Q8NGX8 325 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 TRPC4APQ8TEL6 797 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 MAGEB10Q96LZ2 347 aaPredicted RBP14.15□□□□□ -0.14
CD48-203ENST00000613788 NSUN5Q96P11 429 aaKnown RBP14.15□□□□□ -0.14
CD48-203ENST00000613788 DPH7Q9BTV6 452 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 DRC3Q9H069 523 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 EHD1Q9H4M9 534 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 MANSC1Q9H8J5 431 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 EML4Q9HC35 981 aaKnown RBP14.15□□□□□ -0.14
CD48-203ENST00000613788 ZBTB26Q9HCK0 441 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 ACSS2Q9NR19 701 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 TMEM184CQ9NVA4 438 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 FAM53CQ9NYF3 392 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 ANKMY1Q9P2S6 941 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 APOBEC2Q9Y235 224 aaKnown RBP14.15□□□□□ -0.14
CD48-203ENST00000613788 RIF1Q5UIP0 2472 aaKnown RBP14.15□□□□□ -0.14
CD48-203ENST00000613788 TMEM114B3SHH9 223 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 H7BY64 318 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 SNUPNO95149 360 aaKnown RBP14.15□□□□□ -0.14
CD48-203ENST00000613788 C1GALT1C1LP0DN25 315 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 CDH1P12830 882 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 HOXB3P14651 431 aaPredicted RBP14.15□□□□□ -0.14
CD48-203ENST00000613788 CXCR2P25025 360 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 ARL1P40616 181 aaPredicted RBP14.15□□□□□ -0.14
CD48-203ENST00000613788 GRIA3P42263 894 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms