RNA–Protein interactions for RNA: ENST00000610488.4

PPHLN1-223, Transcript of periphilin 1, human

TSL 5 BASIC

Gene PPHLN1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPHLN1-223	ENST00000610488	OARD1	Q9Y530	152 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	PCDHGA7	Q9Y5G6	932 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CFAP46	Q8IYW2	2715 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	PRAMEF33	A0A0G2JMD5	474 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	ZNF195	O14628	629 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	NUAK1	O60285	661 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	PRAMEF10	O60809	474 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	FUCA1	P04066	466 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	MPC1L	P0DKB6	136 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	TSPAN8	P19075	237 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	SERPINB3	P29508	390 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	PBLD	P30039	288 aa	Predicted RBP	13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	ETV5	P41161	510 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	HK2	P52789	917 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	CDH13	P55290	713 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	CTBS	Q01459	385 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	SRSF6	Q13247	344 aa	Known RBP	13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	TGIF1	Q15583	401 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	PPP1R3A	Q16821	1122 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	SYTL3	Q4VX76	610 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	SH2D4B	Q5SQS7	431 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	ADAMTSL4	Q6UY14	1074 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	CUZD1	Q86UP6	607 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	VRK3	Q8IV63	474 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	SKA2	Q8WVK7	121 aa	Predicted RBP	13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	ASZ1	Q8WWH4	475 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	TTC9	Q92623	222 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	ERP27	Q96DN0	273 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	RILP	Q96NA2	401 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	EBF4	Q9BQW3	602 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	CCM2	Q9BSQ5	444 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	TRMO	Q9BU70	441 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	SEMA4C	Q9C0C4	833 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	MYLK2	Q9H1R3	596 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	STN1	Q9H668	368 aa	Known RBP	13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	AKAP7	Q9P0M2	348 aa	Predicted RBP	13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	ATXN10	Q9UBB4	475 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	PLEKHM1	Q9Y4G2	1056 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	BSN	Q9UPA5	3926 aa		13.14	□□□□□ -0.31
PPHLN1-223	ENST00000610488	SDK2	Q58EX2	2172 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	MATN2	O00339	956 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	ZW10	O43264	779 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	DIAPH2	O60879	1101 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	UBOX5	O94941	541 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	GUCA1C	O95843	209 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	RPS17	P08708	135 aa	Known RBP	13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	PLA2G2A	P14555	144 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	ACTR1B	P42025	376 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	AGTR2	P50052	363 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	IDH3A	P50213	366 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	ACTR1A	P61163	376 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	ZFP36L1	Q07352	338 aa	Known RBP	13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	GALNT1	Q10472	559 aa	Predicted RBP	13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	PHKG1	Q16816	387 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	BCL7A	Q4VC05	210 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	VWA5B1	Q5TIE3	1220 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	ANKS6	Q68DC2	871 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	USP53	Q70EK8	1073 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	MTDH	Q86UE4	582 aa	Known RBP	13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	TRAPPC5	Q8IUR0	188 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	SLITRK4	Q8IW52	837 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	RCBTB1	Q8NDN9	531 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	USP7	Q93009	1102 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	TMEM159	Q96B96	161 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	COX14	Q96I36	57 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	NSUN5	Q96P11	429 aa	Known RBP	13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	OR2M4	Q96R27	311 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	EGFL8	Q99944	293 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	NUDT22	Q9BRQ3	303 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	COG4	Q9H9E3	785 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	ZFP69B	Q9UJL9	534 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	CDYL	Q9Y232	598 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	SLC17A4	Q9Y2C5	497 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	FIS1	Q9Y3D6	152 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	COL6A6	A6NMZ7	2263 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	TMEM233	B4DJY2	109 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	SLCO1B7	G3V0H7	640 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	UBFD1	O14562	309 aa	Known RBP	13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	HDAC3	O15379	428 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	GRID2	O43424	1007 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	B4GAT1	O43505	415 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	VEGFD	O43915	354 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	GPC4	O75487	556 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	CPNE6	O95741	557 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	C8G	P07360	202 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	LIPC	P11150	499 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	ZNF8	P17098	575 aa	Predicted RBP	13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	VCL	P18206	1134 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	TEAD1	P28347	426 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	NAA20	P61599	178 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	CLC	Q05315	142 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	C16orf72	Q14CZ0	275 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	MANEA	Q5SRI9	462 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	NKAIN2	Q5VXU1	208 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	NEK10	Q6ZWH5	1172 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	UBE2R2	Q712K3	238 aa	Predicted RBP	13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	VASH2	Q86V25	355 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	ZFAND4	Q86XD8	727 aa		13.13	□□□□□ -0.31
PPHLN1-223	ENST00000610488	GALNT13	Q8IUC8	556 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms