RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 HIST1H2AHQ96KK5 128 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 CCDC138Q96M89 665 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 PKP4Q99569 1192 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 HIST1H2AJQ99878 128 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 H2AFJQ9BTM1 129 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 TWSG1Q9GZX9 223 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 OXSMQ9NWU1 459 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 TMCO1Q9UM00 188 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 PIPSLA2A3N6 862 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 WDR91A4D1P6 747 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 PABPN1LA6NDY0 278 aaKnown RBP14.47□□□□□ -0.09
TRIM28-207ENST00000597136 C1QTNF9BB2RNN3 333 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 PRAMEF10O60809 474 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 RASSF9O75901 435 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 IPO13O94829 963 aaKnown RBP14.47□□□□□ -0.09
TRIM28-207ENST00000597136 C1QTNF9P0C862 333 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 FGF3P11487 239 aaPredicted RBP14.47□□□□□ -0.09
TRIM28-207ENST00000597136 GFAPP14136 432 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 RAB28P51157 221 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 ALDH18A1P54886 795 aaKnown RBP14.47□□□□□ -0.09
TRIM28-207ENST00000597136 NFKB2Q00653 900 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 CYP4F3Q08477 520 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 KLHL35Q6PF15 583 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 MTERF4Q7Z6M4 381 aaKnown RBP14.47□□□□□ -0.09
TRIM28-207ENST00000597136 NUDCD3Q8IVD9 361 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 FBXO39Q8N4B4 442 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 OR9A1PQ8NGU1 263 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 WDR36Q8NI36 951 aaKnown RBP14.47□□□□□ -0.09
TRIM28-207ENST00000597136 RHBDF1Q96CC6 855 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 CCDC126Q96EE4 140 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 PHF21BQ96EK2 531 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 ZDHHC12Q96GR4 267 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 OR2A14Q96R47 310 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 EGFL8Q99944 293 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 STRADBQ9C0K7 418 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 NRSN2Q9GZP1 204 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 KLHL25Q9H0H3 589 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 ACTR10Q9NZ32 417 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 PTBP2Q9UKA9 531 aaKnown RBP14.47□□□□□ -0.09
TRIM28-207ENST00000597136 POMT2Q9UKY4 750 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 LOXL2Q9Y4K0 774 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 AK5Q9Y6K8 562 aa14.47□□□□□ -0.09
TRIM28-207ENST00000597136 TMX2-CTNND1H3BSU7 103 aa14.46□□□□□ -0.09
TRIM28-207ENST00000597136 POLR3GO15318 223 aaPredicted RBP14.46□□□□□ -0.09
TRIM28-207ENST00000597136 SLC16A8O95907 504 aa14.46□□□□□ -0.09
TRIM28-207ENST00000597136 S100BP04271 92 aaPredicted RBP14.46□□□□□ -0.09
TRIM28-207ENST00000597136 ANXA5P08758 320 aa14.46□□□□□ -0.09
TRIM28-207ENST00000597136 PVRP15151 417 aa14.46□□□□□ -0.09
TRIM28-207ENST00000597136 PRKAA2P54646 552 aa14.46□□□□□ -0.09
TRIM28-207ENST00000597136 GYS2P54840 703 aa14.46□□□□□ -0.09
TRIM28-207ENST00000597136 YBX1P67809 324 aaKnown RBP14.46□□□□□ -0.09
TRIM28-207ENST00000597136 GABREP78334 506 aa14.46□□□□□ -0.09
TRIM28-207ENST00000597136 TRA2AQ13595 282 aaKnown RBP eCLIP14.46□□□□□ -0.09
TRIM28-207ENST00000597136 RTP5Q14D33 572 aa14.46□□□□□ -0.09
TRIM28-207ENST00000597136 SULT1C3Q6IMI6 304 aa14.46□□□□□ -0.09
TRIM28-207ENST00000597136 ARMC6Q6NXE6 501 aa14.46□□□□□ -0.09
TRIM28-207ENST00000597136 TRIM73Q86UV7 250 aa14.46□□□□□ -0.09
TRIM28-207ENST00000597136 SLC22A9Q8IVM8 553 aa14.46□□□□□ -0.09
TRIM28-207ENST00000597136 PTGR2Q8N8N7 351 aaPredicted RBP14.46□□□□□ -0.09
TRIM28-207ENST00000597136 PPFIBP2Q8ND30 876 aa14.46□□□□□ -0.09
TRIM28-207ENST00000597136 OR2L8Q8NGY9 312 aa14.46□□□□□ -0.09
TRIM28-207ENST00000597136 PMEPA1Q969W9 287 aa14.46□□□□□ -0.09
TRIM28-207ENST00000597136 FBXL8Q96CD0 374 aa14.46□□□□□ -0.09
TRIM28-207ENST00000597136 GRAMD1AQ96CP6 724 aa14.46□□□□□ -0.09
TRIM28-207ENST00000597136 POLR1BQ9H9Y6 1135 aa14.46□□□□□ -0.09
TRIM28-207ENST00000597136 OR6C2Q9NZP2 312 aa14.46□□□□□ -0.09
TRIM28-207ENST00000597136 PISDQ9UG56 409 aa14.46□□□□□ -0.09
TRIM28-207ENST00000597136 USP24Q9UPU5 2620 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 A0A1W2PPV9 198 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 SLC9B1P1A6NJY1 282 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 ISM1B1AKI9 464 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 STX16-NPEPL1H3BU86 382 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 STX16O14662 325 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 PLD2O14939 933 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 TAPBPO15533 448 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 PRICKLE3O43900 615 aaPredicted RBP14.45□□□□□ -0.1
TRIM28-207ENST00000597136 TRIM13O60858 407 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 CAPNS1P04632 268 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 UGT2B7P16662 529 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 AGTR2P50052 363 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 HNMTP50135 292 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 MAPK10P53779 464 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 DNAJB13P59910 316 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 SH3BP2P78314 561 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 GUCY1A3Q02108 690 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 PRKAA1Q13131 559 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 KCNAB1Q14722 419 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 SETDB1Q15047 1291 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 ZXDCQ2QGD7 858 aaPredicted RBP14.45□□□□□ -0.1
TRIM28-207ENST00000597136 LIPMQ5VYY2 423 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 DYDC1Q8WWB3 177 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 KLHL6Q8WZ60 621 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 SEMA5BQ9P283 1151 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 STOX2Q9P2F5 926 aaPredicted RBP14.45□□□□□ -0.1
TRIM28-207ENST00000597136 KLHL20Q9Y2M5 609 aa14.45□□□□□ -0.1
TRIM28-207ENST00000597136 EFCAB7A8K855 629 aa14.44□□□□□ -0.1
TRIM28-207ENST00000597136 C2orf74A8MZ97 194 aa14.44□□□□□ -0.1
TRIM28-207ENST00000597136 HGSO14964 777 aaPredicted RBP14.44□□□□□ -0.1
TRIM28-207ENST00000597136 BRINP1O60477 761 aa14.44□□□□□ -0.1
TRIM28-207ENST00000597136 TNFSF15O95150 251 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms