RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 GNA13Q14344 377 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 TSNQ15631 228 aaKnown RBP14.78□□□□□ -0.04
CIRBP-228ENST00000590347 TMEM81Q6P7N7 255 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 PLET1Q6UQ28 207 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 ZPBP2Q6X784 338 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 CHST13Q8NET6 341 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 GGHQ92820 318 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 SLC22A4Q9H015 551 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 KCNN2Q9H2S1 579 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 NSMCE4AQ9NXX6 385 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 ATPIF1Q9UII2 106 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 WASHC1A8K0Z3 465 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 FFAR3O14843 346 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 GPR42O15529 346 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 BEST1O76090 585 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 AQP1P29972 269 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 GPC1P35052 558 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 ST3GAL4Q11206 333 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 KCTD2Q14681 263 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 XRRA1Q6P2D8 792 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 RAB44Q7Z6P3 723 aaPredicted RBP14.78□□□□□ -0.04
CIRBP-228ENST00000590347 ZBTB8OSQ8IWT0 167 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 CHPFQ8IZ52 775 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 TTLQ8NG68 377 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 TTC9Q92623 222 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 RADILQ96JH8 1075 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 RDH12Q96NR8 316 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 TTLL2Q9BWV7 592 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 ASPNQ9BXN1 380 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 MUC13Q9H3R2 512 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 CD274Q9NZQ7 290 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 MAFBQ9Y5Q3 323 aaPredicted RBP14.78□□□□□ -0.04
CIRBP-228ENST00000590347 COL1A2P08123 1366 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 KIAA1217Q5T5P2 1943 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 NT5C1B-RDH14C9J2C7 533 aa14.77□□□□□ -0.04
CIRBP-228ENST00000590347 PER2O15055 1255 aa14.77□□□□□ -0.04
CIRBP-228ENST00000590347 TSPAN19P0C672 248 aa14.77□□□□□ -0.04
CIRBP-228ENST00000590347 ITGALP20701 1170 aa14.77□□□□□ -0.04
CIRBP-228ENST00000590347 UGT2B10P36537 528 aa14.77□□□□□ -0.04
CIRBP-228ENST00000590347 EIF2B5Q13144 721 aaKnown RBP14.77□□□□□ -0.04
CIRBP-228ENST00000590347 PDZK1Q5T2W1 519 aa14.77□□□□□ -0.04
CIRBP-228ENST00000590347 BRAT1Q6PJG6 821 aa14.77□□□□□ -0.04
CIRBP-228ENST00000590347 IL27RAQ6UWB1 636 aa14.77□□□□□ -0.04
CIRBP-228ENST00000590347 VWA5B2Q8N398 1253 aa14.77□□□□□ -0.04
CIRBP-228ENST00000590347 LHFPL5Q8TAF8 219 aa14.77□□□□□ -0.04
CIRBP-228ENST00000590347 ZNF566Q969W8 418 aa14.77□□□□□ -0.04
CIRBP-228ENST00000590347 C18orf25Q96B23 403 aaPredicted RBP14.77□□□□□ -0.04
CIRBP-228ENST00000590347 DIRAS2Q96HU8 199 aa14.77□□□□□ -0.04
CIRBP-228ENST00000590347 ACTL8Q9H568 366 aa14.77□□□□□ -0.04
CIRBP-228ENST00000590347 CCSER2Q9H7U1 834 aa14.77□□□□□ -0.04
CIRBP-228ENST00000590347 DYRK4Q9NR20 520 aa14.77□□□□□ -0.04
CIRBP-228ENST00000590347 SLC25A37Q9NYZ2 338 aa14.77□□□□□ -0.04
CIRBP-228ENST00000590347 PCDHGB2Q9Y5G2 931 aa14.77□□□□□ -0.04
CIRBP-228ENST00000590347 PITPNM1O00562 1244 aa14.77□□□□□ -0.05
CIRBP-228ENST00000590347 FABP7O15540 132 aa14.77□□□□□ -0.05
CIRBP-228ENST00000590347 PROS1P07225 676 aa14.77□□□□□ -0.05
CIRBP-228ENST00000590347 CSF3P09919 207 aa14.77□□□□□ -0.05
CIRBP-228ENST00000590347 KELP23276 732 aa14.77□□□□□ -0.05
CIRBP-228ENST00000590347 MAN2A2P49641 1150 aa14.77□□□□□ -0.05
CIRBP-228ENST00000590347 GPR19Q15760 415 aa14.77□□□□□ -0.05
CIRBP-228ENST00000590347 RFTN2Q52LD8 501 aaPredicted RBP14.77□□□□□ -0.05
CIRBP-228ENST00000590347 SPANXN4Q5MJ08 99 aa14.77□□□□□ -0.05
CIRBP-228ENST00000590347 SHEQ5VZ18 495 aa14.77□□□□□ -0.05
CIRBP-228ENST00000590347 C11orf84Q9BUA3 381 aaPredicted RBP14.77□□□□□ -0.05
CIRBP-228ENST00000590347 EIF2B4Q9UI10 523 aaKnown RBP14.77□□□□□ -0.05
CIRBP-228ENST00000590347 DICER1Q9UPY3 1922 aaKnown RBP14.77□□□□□ -0.05
CIRBP-228ENST00000590347 TOR1AO14656 332 aa14.77□□□□□ -0.05
CIRBP-228ENST00000590347 PLOD3O60568 738 aa14.77□□□□□ -0.05
CIRBP-228ENST00000590347 SCN1BQ07699 218 aa14.77□□□□□ -0.05
CIRBP-228ENST00000590347 RPA4Q13156 261 aa14.77□□□□□ -0.05
CIRBP-228ENST00000590347 SLC10A6Q3KNW5 377 aa14.77□□□□□ -0.05
CIRBP-228ENST00000590347 USP39Q53GS9 565 aaKnown RBP14.77□□□□□ -0.05
CIRBP-228ENST00000590347 FBXO39Q8N4B4 442 aa14.77□□□□□ -0.05
CIRBP-228ENST00000590347 CEP76Q8TAP6 659 aa14.77□□□□□ -0.05
CIRBP-228ENST00000590347 CENPIQ92674 756 aaPredicted RBP14.77□□□□□ -0.05
CIRBP-228ENST00000590347 SENP8Q96LD8 212 aa14.77□□□□□ -0.05
CIRBP-228ENST00000590347 FDXACB1Q9BRP7 624 aaPredicted RBP14.77□□□□□ -0.05
CIRBP-228ENST00000590347 RNF112Q9ULX5 631 aa14.77□□□□□ -0.05
CIRBP-228ENST00000590347 NEUROG3Q9Y4Z2 214 aa14.77□□□□□ -0.05
CIRBP-228ENST00000590347 USP34Q70CQ2 3546 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 PLA2G10O15496 165 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 UGT2B17O75795 530 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 CNMDO75829 334 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 TNFRSF1BP20333 461 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 APEX1P27695 318 aaKnown RBP14.76□□□□□ -0.05
CIRBP-228ENST00000590347 GJA5P36382 358 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 MRPL28Q13084 256 aaKnown RBP14.76□□□□□ -0.05
CIRBP-228ENST00000590347 TMEM132DQ14C87 1099 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 UGT8Q16880 541 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 ZNF284Q2VY69 593 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 SAXO2Q658L1 398 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 ZNF767PQ75MW2 155 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 ZFAND4Q86XD8 727 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 ZNF680Q8NEM1 530 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 REPS1Q96D71 796 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 TPD52L3Q96J77 140 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 USB1Q9BQ65 265 aaKnown RBP14.76□□□□□ -0.05
CIRBP-228ENST00000590347 SRRQ9GZT4 340 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 SCPEP1Q9HB40 452 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 SCN1AP35498 2009 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms