RNA–Protein interactions for RNA: ENST00000587563.5

RPRD1A-205, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-205ENST00000587563 DGKBQ9Y6T7 804 aa4.68□□□□□ -1.66
RPRD1A-205ENST00000587563 COL6A6A6NMZ7 2263 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 A0A1B0GVM2 712 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 CAPN8A6NHC0 703 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 LRRC72A6NJI9 287 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 USP27XA6NNY8 438 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 E9PAM4 449 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 QSOX1O00391 747 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 KPNA3O00505 521 aaPredicted RBP4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 PALMO75781 387 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 FTCDO95954 541 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 RHOCP08134 193 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 KRT7P08729 469 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 THEGLP0DJG4 465 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 T-ENOLP0DO92 83 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 DGKAP23743 735 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 PEX2P28328 305 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 CHRNA3P32297 505 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 RXRGP48443 463 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 KCNJ5P48544 419 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 AGFG1P52594 562 aaKnown RBP4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 AIF1P55008 147 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 CDH6P55285 790 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 MC2RQ01718 297 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 SLC25A11Q02978 314 aaKnown RBP4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 SRSF6Q13247 344 aaKnown RBP4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 C1orf61Q13536 156 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 HNRNPDQ14103 355 aaKnown RBP4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 FZD2Q14332 565 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 ELAVL3Q14576 367 aaKnown RBP4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 TBCCQ15814 346 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 SMTNL2Q2TAL5 461 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 BOLA3Q53S33 107 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 PPP6R3Q5H9R7 873 aaPredicted RBP4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 DNTTIP2Q5QJE6 756 aaKnown RBP4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 RABGAP1LQ5R372 815 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 FAM182AQ5T1J6 154 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 RWDD4Q6NW29 188 aaKnown RBP4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 LVRNQ6Q4G3 990 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 NPNTQ6UXI9 565 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 CYP4V2Q6ZWL3 525 aaPredicted RBP4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 PEX26Q7Z412 305 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 RHOT1Q8IXI2 618 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 SYCE1Q8N0S2 351 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 RBFAQ8N0V3 343 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 C17orf53Q8N3J3 647 aaPredicted RBP4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 LRRC57Q8N9N7 239 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 ATP11CQ8NB49 1132 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 KDM1BQ8NB78 822 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 KCTD6Q8NC69 237 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 TEKT4Q8WW24 435 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 LRTOMTQ8WZ04 291 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 CCT6BQ92526 530 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 TRIM63Q969Q1 353 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 NSMCE3Q96MG7 304 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 FAM210AQ96ND0 272 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 TRMOQ9BU70 441 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 CALN1Q9BXU9 219 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 TM6SF2Q9BZW4 377 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 WDR12Q9GZL7 423 aaKnown RBP4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 GDF3Q9NR23 364 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 VSX1Q9NZR4 365 aaPredicted RBP4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 OR12D3Q9UGF7 316 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 VPS28Q9UK41 221 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 AMFRQ9UKV5 643 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 RPS6KL1Q9Y6S9 549 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 TENM4Q6N022 2769 aa4.67□□□□□ -1.66
RPRD1A-205ENST00000587563 IGLV3-10A0A075B6K4 115 aa4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 A0A087WV48 116 aa4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 TYW5A2RUC4 315 aaKnown RBP4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 LRRD1A4D1F6 860 aa4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 IGLON5A6NGN9 336 aa4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 EEF2KO00418 725 aaKnown RBP4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 RNASEH1O60930 286 aaKnown RBP4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 GCATO75600 419 aa4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 PAK4O96013 591 aaPredicted RBP4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 AMY1AP04745 511 aa4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 CD48P09326 243 aa4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 JUPP14923 745 aa4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 KDELR1P24390 212 aa4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 HTR1BP28222 390 aa4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 CASP2P42575 452 aa4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 SLC6A9P48067 706 aa4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 MARCKSL1P49006 195 aa4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 HTR6P50406 440 aa4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 DNA2P51530 1060 aa4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 ARSEP51690 589 aa4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 CDH4P55283 916 aa4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 TPI1P60174 286 aa4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 CTXN1P60606 82 aa4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 HOXA4Q00056 320 aaPredicted RBP4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 ZNF177Q13360 481 aaPredicted RBP4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 FHL3Q13643 280 aa4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 POLD3Q15054 466 aaPredicted RBP4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 CNN3Q15417 329 aaKnown RBP4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 ODF2Q5BJF6 829 aa4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 ZNF569Q5MCW4 686 aa4.66□□□□□ -1.66
RPRD1A-205ENST00000587563 THEMIS2Q5TEJ8 643 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms