RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 EBLN1P0CF75 366 aa19.63■□□□□ 0.73
SMG8-203ENST00000578922 LBPP18428 481 aa19.63■□□□□ 0.73
SMG8-203ENST00000578922 ACADLP28330 430 aa19.63■□□□□ 0.73
SMG8-203ENST00000578922 TEAD1P28347 426 aa19.63■□□□□ 0.73
SMG8-203ENST00000578922 SFSWAPQ12872 951 aaKnown RBP19.63■□□□□ 0.73
SMG8-203ENST00000578922 GAS6Q14393 721 aa19.63■□□□□ 0.73
SMG8-203ENST00000578922 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.63■□□□□ 0.73
SMG8-203ENST00000578922 XKR7Q5GH72 579 aa19.63■□□□□ 0.73
SMG8-203ENST00000578922 METTL2BQ6P1Q9 378 aaKnown RBP19.63■□□□□ 0.73
SMG8-203ENST00000578922 FAM156AQ8NDB6 213 aa19.63■□□□□ 0.73
SMG8-203ENST00000578922 OR9I1Q8NGQ6 314 aa19.63■□□□□ 0.73
SMG8-203ENST00000578922 C1orf50Q9BV19 199 aa19.63■□□□□ 0.73
SMG8-203ENST00000578922 FOXQ1Q9C009 403 aa19.63■□□□□ 0.73
SMG8-203ENST00000578922 DPEP2Q9H4A9 486 aa19.63■□□□□ 0.73
SMG8-203ENST00000578922 FBXL21Q9UKT6 434 aa19.63■□□□□ 0.73
SMG8-203ENST00000578922 PLAGL1Q9UM63 463 aa19.63■□□□□ 0.73
SMG8-203ENST00000578922 KCNK6Q9Y257 313 aa19.63■□□□□ 0.73
SMG8-203ENST00000578922 KRBA1A5PL33 1030 aa19.62■□□□□ 0.73
SMG8-203ENST00000578922 PRORSD1PA6NEY8 169 aa19.62■□□□□ 0.73
SMG8-203ENST00000578922 CACNB4O00305 520 aaPredicted RBP19.62■□□□□ 0.73
SMG8-203ENST00000578922 CLDN9O95484 217 aa19.62■□□□□ 0.73
SMG8-203ENST00000578922 ETS2P15036 469 aa19.62■□□□□ 0.73
SMG8-203ENST00000578922 ATXN3P54252 364 aaPredicted RBP19.62■□□□□ 0.73
SMG8-203ENST00000578922 NADK2Q4G0N4 442 aa19.62■□□□□ 0.73
SMG8-203ENST00000578922 RBM44Q6ZP01 1051 aaKnown RBP19.62■□□□□ 0.73
SMG8-203ENST00000578922 THOC6Q86W42 341 aaKnown RBP19.62■□□□□ 0.73
SMG8-203ENST00000578922 CHERPQ8IWX8 916 aaKnown RBP19.62■□□□□ 0.73
SMG8-203ENST00000578922 OR5AR1Q8NGP9 310 aa19.62■□□□□ 0.73
SMG8-203ENST00000578922 OR2T34Q8NGX1 318 aa19.62■□□□□ 0.73
SMG8-203ENST00000578922 HHIPQ96QV1 700 aa19.62■□□□□ 0.73
SMG8-203ENST00000578922 HAUS8Q9BT25 410 aa19.62■□□□□ 0.73
SMG8-203ENST00000578922 RBM38Q9H0Z9 239 aaKnown RBP19.62■□□□□ 0.73
SMG8-203ENST00000578922 GPSM3Q9Y4H4 160 aa19.62■□□□□ 0.73
SMG8-203ENST00000578922 LRRC72A6NJI9 287 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 PRAMEF4O60810 478 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 OR6B1O95007 311 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 HALP42357 657 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 DIO3P55073 304 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 PLOD1Q02809 727 aaPredicted RBP19.61■□□□□ 0.73
SMG8-203ENST00000578922 PRKG2Q13237 762 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 PRAMEF9Q5VWM5 478 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 PRMT9Q6P2P2 845 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 Q6ZSR9 355 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 SYTL1Q8IYJ3 562 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 PRPF18Q99633 342 aaKnown RBP19.61■□□□□ 0.73
SMG8-203ENST00000578922 NRTNQ99748 197 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 PCDHAC1Q9H158 963 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 ITM2CQ9NQX7 267 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 TDRKHQ9Y2W6 561 aaKnown RBP19.61■□□□□ 0.73
SMG8-203ENST00000578922 C9JVG2 144 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 PDLIM1O00151 329 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 SEMA4FO95754 770 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 MAPK9P45984 424 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 DGKEP52429 567 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 PDZD3Q86UT5 571 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 ZNF687Q8N1G0 1237 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 OXR1Q8N573 874 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 C2orf73Q8N5S3 287 aaPredicted RBP19.61■□□□□ 0.73
SMG8-203ENST00000578922 METTL25Q8N6Q8 603 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 ZNF480Q8WV37 535 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 ATL1Q8WXF7 558 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 HOPXQ9BPY8 73 aaPredicted RBP19.61■□□□□ 0.73
SMG8-203ENST00000578922 COQ10BQ9H8M1 238 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 FGF22Q9HCT0 170 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 TRPS1Q9UHF7 1281 aa19.61■□□□□ 0.73
SMG8-203ENST00000578922 ZNF490Q9ULM2 529 aaPredicted RBP19.61■□□□□ 0.73
SMG8-203ENST00000578922 VCANP13611 3396 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 VPS4BO75351 444 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 GNPDA1P46926 289 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 CLCNKAP51800 687 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 NR6A1Q15406 480 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 METRNLQ641Q3 311 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 DUS1LQ6P1R4 473 aaKnown RBP19.6■□□□□ 0.73
SMG8-203ENST00000578922 IYDQ6PHW0 289 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 DHFR2Q86XF0 187 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 GALNT13Q8IUC8 556 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 SFRP1Q8N474 314 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 FRMD1Q8N878 549 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 GOLM1Q8NBJ4 401 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 TFGQ92734 400 aaPredicted RBP19.6■□□□□ 0.73
SMG8-203ENST00000578922 ZUFSPQ96AP4 578 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 NMD3Q96D46 503 aaKnown RBP19.6■□□□□ 0.73
SMG8-203ENST00000578922 IL17FQ96PD4 163 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 OR4K3Q96R72 315 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 C6orf106Q9H6K1 298 aaPredicted RBP19.6■□□□□ 0.73
SMG8-203ENST00000578922 RIC8BQ9NVN3 520 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 ARMC1Q9NVT9 282 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 PCDHGB4Q9UN71 923 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 SLC17A4Q9Y2C5 497 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 NDUFAF1Q9Y375 327 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 PCDHGB5Q9Y5G0 923 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 FPGTO14772 594 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 ULK1O75385 1050 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 HMGCS1Q01581 520 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 CHIT1Q13231 466 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 SPATS1Q496A3 300 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 ATP6AP1LQ52LC2 224 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 TPRG1LQ5T0D9 272 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 TRIM69Q86WT6 500 aa19.6■□□□□ 0.73
SMG8-203ENST00000578922 FNDC5Q8NAU1 212 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms