RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 RPTNQ6XPR3 784 aa5.05□□□□□ -1.6
BRIP1-202ENST00000577598 C17orf107Q6ZR85 190 aa5.05□□□□□ -1.6
BRIP1-202ENST00000577598 LARP4Q71RC2 724 aaKnown RBP eCLIP5.05□□□□□ -1.64e-6■■■■■ 34.3
BRIP1-202ENST00000577598 LRRC6Q86X45 466 aa5.05□□□□□ -1.6
BRIP1-202ENST00000577598 VRK2Q86Y07 508 aa5.05□□□□□ -1.6
BRIP1-202ENST00000577598 LRRC49Q8IUZ0 686 aa5.05□□□□□ -1.6
BRIP1-202ENST00000577598 OR4N4Q8N0Y3 316 aa5.05□□□□□ -1.6
BRIP1-202ENST00000577598 DNAAF3Q8N9W5 541 aa5.05□□□□□ -1.6
BRIP1-202ENST00000577598 DNERQ8NFT8 737 aa5.05□□□□□ -1.6
BRIP1-202ENST00000577598 OR8K3Q8NH51 312 aa5.05□□□□□ -1.6
BRIP1-202ENST00000577598 ATG4AQ8WYN0 398 aa5.05□□□□□ -1.6
BRIP1-202ENST00000577598 LARP4BQ92615 738 aaKnown RBP5.05□□□□□ -1.6
BRIP1-202ENST00000577598 MAP4K1Q92918 833 aa5.05□□□□□ -1.6
BRIP1-202ENST00000577598 ART5Q96L15 291 aa5.05□□□□□ -1.6
BRIP1-202ENST00000577598 CPNE1Q99829 537 aa5.05□□□□□ -1.6
BRIP1-202ENST00000577598 SPATC1LQ9H0A9 340 aa5.05□□□□□ -1.6
BRIP1-202ENST00000577598 MAGEF1Q9HAY2 307 aa5.05□□□□□ -1.6
BRIP1-202ENST00000577598 TRIM36Q9NQ86 728 aa5.05□□□□□ -1.6
BRIP1-202ENST00000577598 FER1L5A0AVI2 2057 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 MAP2K7O14733 419 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 PIGNO95427 931 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 KCNA5P22460 613 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 TBXAS1P24557 533 aaPredicted RBP5.04□□□□□ -1.6
BRIP1-202ENST00000577598 UGT2B10P36537 528 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 DR1Q01658 176 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 TUBB3Q13509 450 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 PIGHQ14442 188 aaPredicted RBP5.04□□□□□ -1.6
BRIP1-202ENST00000577598 ST3GAL2Q16842 350 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 NKPD1Q17RQ9 610 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 LGSNQ5TDP6 509 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 INO80CQ6PI98 192 aaPredicted RBP5.04□□□□□ -1.6
BRIP1-202ENST00000577598 BEND4Q6ZU67 534 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 SETD3Q86TU7 594 aaPredicted RBP5.04□□□□□ -1.6
BRIP1-202ENST00000577598 ZNF546Q86UE3 836 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 HPS6Q86YV9 775 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 IZUMO1Q8IYV9 350 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 GALNT16Q8N428 558 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 FAM98AQ8NCA5 519 aaKnown RBP5.04□□□□□ -1.6
BRIP1-202ENST00000577598 LKAAEAR1Q8TD35 194 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 IRGQQ8WZA9 623 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 CEP19Q96LK0 163 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 TMEM43Q9BTV4 400 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 KCNK15Q9H427 330 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 NEK6Q9HC98 313 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 DAPK2Q9UIK4 370 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 LNPEPQ9UIQ6 1025 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 CDH9Q9ULB4 789 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 I6L893 689 aaPredicted RBP5.04□□□□□ -1.6
BRIP1-202ENST00000577598 ZNF217O75362 1048 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 ICAM1P05362 532 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 UBCP0CG48 685 aaKnown RBP5.04□□□□□ -1.6
BRIP1-202ENST00000577598 ZNF182P17025 639 aaPredicted RBP5.04□□□□□ -1.6
BRIP1-202ENST00000577598 KCNA3P22001 575 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 TOB2Q14106 344 aaPredicted RBP5.04□□□□□ -1.6
BRIP1-202ENST00000577598 CRY2Q49AN0 593 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 KLHL22Q53GT1 634 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 FFAR4Q5NUL3 377 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 OR2A2Q6IF42 318 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 TRIM65Q6PJ69 517 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 TRIM48Q8IWZ4 208 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 ATP6V1C2Q8NEY4 427 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 SOCS4Q8WXH5 440 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 TRNT1Q96Q11 434 aaKnown RBP5.04□□□□□ -1.6
BRIP1-202ENST00000577598 CPPED1Q9BRF8 314 aaPredicted RBP5.04□□□□□ -1.6
BRIP1-202ENST00000577598 SYNPO2LQ9H987 977 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 CRNNQ9UBG3 495 aaPredicted RBP5.04□□□□□ -1.6
BRIP1-202ENST00000577598 UBE2QL1A1L167 161 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 TMEM221A6NGB7 291 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 EIF4E1BA6NMX2 242 aaKnown RBP5.04□□□□□ -1.6
BRIP1-202ENST00000577598 H0Y8G0 127 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 FFAR3O14843 346 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 OGTO15294 1046 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 GPR42O15529 346 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 CPNE6O95741 557 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 LYNP07948 512 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 NQO2P16083 231 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 PNLIPP16233 465 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 STX2P32856 288 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 TRIM23P36406 574 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 LIPAP38571 399 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 RANBP1P43487 201 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 TOB1P50616 345 aaPredicted RBP5.04□□□□□ -1.6
BRIP1-202ENST00000577598 CLCN7P51798 805 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 VBP1P61758 197 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 ADORA2A-AS1P86434 159 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 TOP3AQ13472 1001 aaPredicted RBP5.04□□□□□ -1.6
BRIP1-202ENST00000577598 CHI3L2Q15782 390 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 SNCBQ16143 134 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 HNRNPA1L2Q32P51 320 aaKnown RBP5.04□□□□□ -1.6
BRIP1-202ENST00000577598 ZNF542PQ5EBM4 170 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 LRRC66Q68CR7 880 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 ETV3LQ6ZN32 361 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 DEF8Q6ZN54 512 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 Q71RC1 249 aaPredicted RBP5.04□□□□□ -1.6
BRIP1-202ENST00000577598 RALGPS2Q86X27 583 aaPredicted RBP5.04□□□□□ -1.6
BRIP1-202ENST00000577598 CADM3Q8N126 398 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 MLKLQ8NB16 471 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 COLGALT1Q8NBJ5 622 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 MAIP1Q8WWC4 291 aa5.04□□□□□ -1.6
BRIP1-202ENST00000577598 RASSF5Q8WWW0 418 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms