RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 MDH1P40925 334 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 FOLR3P41439 243 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 MAGEA4P43358 317 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 BDKRB1P46663 353 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 RRADP55042 308 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 CDK16Q00536 496 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 SF1Q15637 639 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 ZIC1Q15915 447 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 IGFBP7Q16270 282 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 KYNUQ16719 465 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 KLHL38Q2WGJ6 581 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 RNF187Q5TA31 235 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 RNASEH2BQ5TBB1 312 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 ZBED8Q8IZ13 594 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 LMNTD1Q8N9Z9 388 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 EPS8L3Q8TE67 593 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 FAM136AQ96C01 138 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 NDC1Q9BTX1 674 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 SPRTNQ9H040 489 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 NSRP1Q9H0G5 558 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 MRM3Q9HC36 420 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 IFT80Q9P2H3 777 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 DHCR7Q9UBM7 475 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 SOX13Q9UN79 622 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 PLCL2Q9UPR0 1127 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 RUVBL2Q9Y230 463 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 CDYLQ9Y232 598 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 KLHL20Q9Y2M5 609 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 NBASA2RRP1 2371 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 SPENQ96T58 3664 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 PRRC2CQ9Y520 2896 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 FLNCQ14315 2725 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 DOPEY2Q9Y3R5 2298 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 A6NL46 340 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 GOLGA8MH3BSY2 632 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 NDUFAB1O14561 156 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 HCRTR1O43613 425 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 NIPSNAP2O75323 286 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 SLCO2B1O94956 709 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 S1PR4O95977 384 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 CBSLP0DN79 551 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 CHRM3P20309 590 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 ALAS2P22557 587 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 FMO4P31512 558 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 LSP1P33241 339 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 CBSP35520 551 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 SLCO1A2P46721 670 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 DCDP81605 110 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 TSTA3Q13630 321 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 ATP1A4Q13733 1029 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 KCNJ11Q14654 390 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 CTSL3PQ5NE16 218 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 RHBDD2Q6NTF9 364 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 TLDC1Q6P9B6 456 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 CNPY4Q8N129 248 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 EFCAB3Q8N7B9 438 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 TTC29Q8NA56 475 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 LINC01555Q8NAE3 123 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 OR2L8Q8NGY9 312 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 FLVCR1-AS1Q8TAF5 88 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 UHMK1Q8TAS1 419 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 PROKR1Q8TCW9 393 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 MAGEC3Q8TD91 643 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 BCAS4Q8TDM0 211 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 ADAMTS17Q8TE56 1095 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 PYROXD1Q8WU10 500 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 DYDC1Q8WWB3 177 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 DLG3Q92796 817 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 RAD51AP1Q96B01 352 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 ZNF669Q96BR6 464 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 TLCD1Q96CP7 247 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 DHRS4Q9BTZ2 278 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 KIFC1Q9BW19 673 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 P2RY12Q9H244 342 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 CCDC68Q9H2F9 335 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 EPB41L4BQ9H329 900 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 SENP1Q9P0U3 644 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 CRYL1Q9Y2S2 319 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 PTRH2Q9Y3E5 179 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 DOCK10Q96BY6 2186 aa9.29□□□□□ -0.92
NPLOC4-216ENST00000574344 COL12A1Q99715 3063 aa9.28□□□□□ -0.92
NPLOC4-216ENST00000574344 PCSK5Q92824 1860 aa9.28□□□□□ -0.92
NPLOC4-216ENST00000574344 KRT87PA6NCN2 255 aa9.28□□□□□ -0.92
NPLOC4-216ENST00000574344 TTLL8A6PVC2 850 aa9.28□□□□□ -0.92
NPLOC4-216ENST00000574344 H3BMM5 538 aa9.28□□□□□ -0.92
NPLOC4-216ENST00000574344 PEX12O00623 359 aa9.28□□□□□ -0.92
NPLOC4-216ENST00000574344 AVILO75366 819 aa9.28□□□□□ -0.92
NPLOC4-216ENST00000574344 PDGFAP04085 211 aa9.28□□□□□ -0.92
NPLOC4-216ENST00000574344 CAPN1P07384 714 aa9.28□□□□□ -0.92
NPLOC4-216ENST00000574344 CTSBP07858 339 aa9.28□□□□□ -0.92
NPLOC4-216ENST00000574344 CD63P08962 238 aa9.28□□□□□ -0.92
NPLOC4-216ENST00000574344 OGNP20774 298 aaKnown RBP9.28□□□□□ -0.92
NPLOC4-216ENST00000574344 PSMB5P28074 263 aa9.28□□□□□ -0.92
NPLOC4-216ENST00000574344 STX2P32856 288 aa9.28□□□□□ -0.92
NPLOC4-216ENST00000574344 CCNFP41002 786 aa9.28□□□□□ -0.92
NPLOC4-216ENST00000574344 GRIA3P42263 894 aa9.28□□□□□ -0.92
NPLOC4-216ENST00000574344 GABRA4P48169 554 aa9.28□□□□□ -0.92
NPLOC4-216ENST00000574344 MLLT10P55197 1068 aa9.28□□□□□ -0.92
NPLOC4-216ENST00000574344 FOXK1P85037 733 aa9.28□□□□□ -0.92
NPLOC4-216ENST00000574344 GUCY1A3Q02108 690 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms